loading error on "DefineClones.py bygroup -h"

[Former user]

Maybe my installation (on local machine, MacOS) isn't done properly, but this is output:

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Error in dyn.load("SHMDistance.so") : unable to load shared object '/Users/soniat/src/repos/changeo/rlib/SHMDistance.so': dlopen(/Users/soniat/src/repos/changeo/rlib/SHMDistance.so, 6): no suitable image found. Did find: /Users/soniat/src/repos/changeo/rlib/SHMDistance.so: unknown file type, first eight bytes: 0x7F 0x45 0x4C 0x46 0x02 0x01 0x01 0x00 Traceback (most recent call last): File "/Users/soniat/src/repos/changeo/DefineClones.py", line 46, in <module> SHMClones = STAP(r_script, 'SHMClones') File "/usr/local/Cellar/python/2.7.6/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/rpy2/robjects/packages.py", line 256, in init reval(string, env) File "/usr/local/Cellar/python/2.7.6/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/rpy2/robjects/packages.py", line 66, in reval res = _reval(p, envir = envir) rpy2.rinterface.RRuntimeError: Error in dyn.load("SHMDistance.so") : unable to load shared object '/Users/soniat/src/repos/changeo/rlib/SHMDistance.so': dlopen(/Users/soniat/src/repos/changeo/rlib/SHMDistance.so, 6): no suitable image found. Did find: /Users/soniat/src/repos/changeo/rlib/SHMDistance.so: unknown file type, first eight bytes: 0x7F 0x45 0x4C 0x46 0x02 0x01 0x01 0x00

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[Former user]

This worked for me :

.... build the distance library on Os X: (in changeo repo dir) gcc -c -fPIC SHMDistance.c -o SHMDistance.o gcc -shared -Wl,-dylib_install_name,SHMDistance.so -o SHMDistance.so SHMDistance.o

[Jason Vander Heiden]

SHMDistance.c compile on Os X worked.