How does DefineClones deal with non-nuc characters

Issue #34 resolved
Namita Gupta created an issue

Finally, for some reason my file has a few locations where the junction is recorded as the string "None", and this was being treated as an actual junction.

Comments (1)

  1. Namita Gupta reporter

    Now any character not considered in your given model's distance matrix (e.g., IUPAC ambiguous DNA for hamming, 'ACGTN.-' for hs5f) will give an error when trying to look up the distance in the model's distance matrix.

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