kleinstein / changeo / issues / #38 - How should X be scored in DefineClones? — Bitbucket

Issue #38 resolved

Jason Vander Heiden created an issue 2015-06-10

Currently, X is a mismatch in the 'aa' model of DefineClones... Correct?

Comments (2)

Jason Vander Heiden reporter
I changed the default so that X and gap characters always count as a match in a3ac399... Pending some info as to why this is the way it is.
- 2017-03-16T18:17:40+00:00
Jason Vander Heiden reporter
- changed status to resolved
No one knows, so I'm leaving the change in behavior such that an X matches any character.
- 2017-03-17T17:47:31+00:00
Log in to comment

Assignee: Namita Gupta

Type: task

Priority: minor

Status: resolved

Milestone: –

Votes: 0

Watchers: 1

Jira: the preferred issue tracker for Bitbucket. Join the team!