MakeDb does not work for IgBLAST 1.6.1

Issue #83 resolved
Jason Vander Heiden created an issue

IgBLAST 1.6 added a "clonotype report" to the end of the output file that starts with:

Total queries = 500000
Total identifiable CDR3 = 2425
Total unique clonotypes = 1510

#Clonotype summary.

Everything after this section cannot be parsed.

We need to update the parser to handle v1.6 and also test v1.5.

Comments (2)

  1. Jason Vander Heiden reporter

    Tested v1.4.0, v1.5.0 and v1.6.1 and the results were comparable. Still probably needs more testing, but we need a complete test of MakeDb, so I'm closing this.

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