- p -
- parallel_apply_preconditioner()
: CG_solver
, ConjugateGradientSolver
, NoMassCGSolver
- parallel_sparse_matrix_apply()
: ConjugateGradientSolver
- parallel_vector_add()
: CG_solver
, ConjugateGradientSolver
- parallel_vector_add_self()
: CG_solver
, ConjugateGradientSolver
- parse_map_tag()
: FFEA_input_reader
- parse_param_assignment()
: SimulationParams
- parse_tag()
: FFEA_input_reader
- pbc()
: LinkedListCube< T >
- perform_integrals_for_lookup_cell_relative()
: BEM_Poisson_Boltzmann
- perform_integrals_for_lookup_cell_self()
: BEM_Poisson_Boltzmann
- pin_binding_site()
: Blob
- PoissonMatrixQuadratic()
: PoissonMatrixQuadratic
- position()
: Blob
- position_beads()
: Blob
- pre_print()
: Blob
- prebuild_nearest_neighbour_lookup()
: NearestNeighbourLinkedListCube
- prebuild_nearest_neighbour_lookup_and_swap()
: NearestNeighbourLinkedListCube
- prebuild_nearest_neighbour_lookup_wrapper()
: World
- prebuild_pc_nearest_neighbour_lookup()
: PreComp_solver
- prebuild_pc_nearest_neighbour_lookup_and_swap()
: PreComp_solver
- PreComp_solver()
: PreComp_solver
- print()
: mesh_node
, SparseMatrixFixedPattern
, SparseMatrixUnknownPattern
, SparsityPattern
, tetra_element_linear
- print_bead_positions()
: Blob
- print_centroid()
: Face
- print_checkpoints()
: World
- print_dense()
: SparseMatrixFixedPattern
- print_dense_to_file()
: SparseMatrixFixedPattern
- print_details()
: MassMatrixLinear
, MassMatrixQuadratic
- print_evals_to_file()
: World
- print_evecs_to_file()
: World
- print_kinetic_files()
: World
- print_kinetic_rates_to_screen()
: World
- print_matrices()
: BEM_Poisson_Boltzmann
, NoMassCGSolver
- print_node_positions()
: Blob
- print_nodes()
: Face
- print_row_column()
: SparseMatrixFixedPattern
- print_static_trajectory()
: World
- print_structural_details()
: tetra_element_linear
- print_to_screen()
: BindingSite
, BindingSite_matrix
- print_trajectory_and_measurement_files()
: World
- print_trajectory_conformation_changes()
: World
- print_viscosity_matrix()
: tetra_element_linear