merge of dccm.mean to filter.dccm

[Lars Skjærven]

in nma vignette:

> cij.all <- filter.dccm(cij$all.dccm, cutoff.sims=9, cutoff.cij = 0)
Error in filter.dccm(cij$all.dccm, cutoff.sims = 9, cutoff.cij = 0) : 
  xyz coordinates or a 'pdbs' object must be provided

[Xinqiu Yao]

Thanks. It should be fixed now.

[Lars Skjærven]

In CNA vignette:

> cij <- filter.dccm(cijs0, pdbs, fac=annotation[, "state3"], cutoff.cij=0.35, dcut=10, scut=0, pcut=0.75, ncore=8)
Error in if (cmap) { : argument is not interpretable as logical
In addition: Warning message:
In if (cmap) { :
  the condition has length > 1 and only the first element will be used

[Xinqiu Yao]

It is fixed by this commit

[Lars Skjærven]

obviously. thanks !