PCA-app, No corresponding PDB files found

[Lars Skjærven]

Hmmm. For entry 4V43, I get Error: No corresponding PDB files found (ALIGN tab). This is a PDB entry with no PDB file to download (only available in .cif format). Any thoughts?

[Barry Grant]

These large structures will not have single PDB files. For the whole structure there is not much we can do without a single input file. Then again we currently don't have the app setup to deal with multiple chains or biological units (although we do now have the bio3d functionality to deal with biounit reconstruction).

For most of these large structures there should be a *_bundle.tar.gz available from which we can pull chains and add them to our chain dataset on the server - would this be enough for now?