PDB file warnings

Hi,

I am using my PDB file for protein.

My protein is labelled via MTSL label at two sites.

During print(pdb), I got warnings for label and as well as for solvent molecule water.

Is there a way I can resolve these warnings.

I understand label parameters are not present in Bio3D files.

How can I bring in those parameters?

I understand I have to add label file to system but how I do not understand.

I am little concerned with TIP3 warnings as well.

Warnings are listed below.

I would appreciate your response.

Mamta

There were 50 or more warnings (use warnings() to see the first 50)

warnings() Warning messages: 1: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: CYR1 2: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: CYR1 3: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 4: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 5: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 6: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 7: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 8: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 9: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 10: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 11: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 12: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 13: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 14: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 15: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 16: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 17: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 18: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 19: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 20: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 21: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 22: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 23: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 24: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 25: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 26: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 27: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 28: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 29: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 30: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 31: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 32: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 33: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 34: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 35: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 36: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 37: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 38: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 39: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 40: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 41: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 42: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 43: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 44: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 45: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 46: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 47: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 48: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 49: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3 50: In FUN(Xi, ...) : Unknown 3-letters code for aminoacid: TIP3

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