Error in downloading PDBs
Issue #470
resolved
The last few days I'm not able to read PDBs from the Protein Databank.
Even the simplest command doesn't work.
For example:
pdb <- read.pdb("4q21") Note: Accessing on-line PDB file Error in matrix(unlist(value, recursive = FALSE, use.names = FALSE), nrow = nr, : length of 'dimnames' [2] not equal to array extent In addition: Warning messages: 1: In download.file(get.files[k], put.files[k], method = "internal", : "internal" method cannot handle https redirection to: 'https://files.rcsb.org/view/4q21.pdb' 2: In download.file(get.files[k], put.files[k], method = "internal", : download had nonzero exit status
Any ideas?
Comments (3)
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reporter Works fine now, thanks a lot!
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reporter - changed status to resolved
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fixed with commit 8a9e20c