scanning pram produces Error in resurl["uuid", 1] : incorrect number of dimensions

This is similar to issue ~~#524~~

The sequence of issued commands is:

aa <- get.seq("3n7h_A") hmm <- hmmer(aa, verbose=F) Error in resurl["uuid", 1] : incorrect number of dimensions

likewise pfam <- hmmer(aa, type="hmmscan", db="pfam") gives ...... * Connection #1 to host www.ebi.ac.uk left intact Error in resurl["uuid", 1] : incorrect number of dimensions

sessionInfo() R version 3.5.0 (2018-04-23) Platform: x86_64-apple-darwin15.6.0 (64-bit) Running under: macOS High Sierra 10.13.5

Matrix products: default BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib LAPACK: /Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libRlapack.dylib

locale: [1] en_GB.UTF-8/en_GB.UTF-8/en_GB.UTF-8/C/en_GB.UTF-8/en_GB.UTF-8

attached base packages: [1] stats graphics grDevices utils datasets [6] methods base

other attached packages: [1] bio3d_2.3-4

loaded via a namespace (and not attached): [1] compiler_3.5.0 parallel_3.5.0 tools_3.5.0
[4] RCurl_1.95-4.10 Rcpp_0.12.17 grid_3.5.0
[7] bitops_1.0-6 XML_3.98-1.11

Comments (2)