Signature dynamics of proteins
Issue #661
new
With reference to:
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Maguid S, Fernandez-Alberti S, Ferrelli L, Echave J. Exploring the common dynamics of homologous proteins. Application to the globin family. Biophys J. 2005;89(1):3-13. Epub 2005/03/08. doi: 10.1529/biophysj.104.053041. PubMed PMID: 15749782; PubMed Central PMCID: PMCPMC1366528 and to:
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Signature dynamics of protein families: http://prody.csb.pitt.edu/signdy/
I'm wondering if it is possible to obtain the shapes of normal modes of proteins from Bio3D. I understand that such shapes are obtained from applying singular value decomposition to vibrational modes of proteins.