export graph file to Cytoscape

[Former user]

Greetings, I like a lot the cna() function! I wonder how to export the graph into a file that can be read by Cytoscape. I browsed the iGraph manual but I could not find a way to export the file in a format readable by Cytoscape. Any hint is greatly appreciated!

[Xinqiu Yao]

You can generate graphs in as many formats as your computer (or R) supports, such as pdf, tiff, etc. But, if you are looking for a specific format that only Cytoscape uses, it is most likely not supported. Check Cytoscape manual first to see what formats are supported, and then think about a way to generate it in R.