Align structures

[Former user]

I totally understand the error message. I want to add my email so i can align the structures. How should i do it? Following is the what i was doing.

Thanks

Jeremiah.

Align structures

pdbs <- pdbaln(files) Reading PDB files: C:\Users\user\AppData\Local\Temp\Rtmpy668fS/1rx2_A.pdb C:\Users\user\AppData\Local\Temp\Rtmpy668fS/1rx4_A.pdb C:\Users\user\AppData\Local\Temp\Rtmpy668fS/1rg7_A.pdb C:\Users\user\AppData\Local\Temp\Rtmpy668fS/3fyv_X.pdb C:\Users\user\AppData\Local\Temp\Rtmpy668fS/3sgy_B.pdb PDB has ALT records, taking A only, rm.alt=TRUE .....

Extracting sequences Error in seqaln(s, id = files, ...) : You do not have muscle installed/working locally on your machine. We can attempt to use the EBI webserver if you provide an email address (required by the EBI). Please note that the EBI states (see their Terms of Use): 'Using fake e-mail address may result in your jobs being killed and your IP, Organisation or entire domain being black-listed.'

[Xinqiu Yao]

Use something like seqaln(..., web.args=list(email='[e-mail]').

Please read the help document carefully.

[Xinqiu Yao]

Not a bug