error in launching pymol
hello team,
i am usuing bio3D in in R in Linux based system. where pymol is installed in to "/home/user1/pymol/pymol/bin/pymol"
i am unable to launch pymol. (i have completed all the required analysis and want to View the correlations in pymol)
sessionInfo()
R version 3.4.4 (2018-03-15)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 18.04.4 LTS
Matrix products: default
BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.7.1
LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.7.1
locale:
[1] LC_CTYPE=en_IN LC_NUMERIC=C LC_TIME=en_IN
[4] LC_COLLATE=en_IN LC_MONETARY=en_IN LC_MESSAGES=en_IN
[7] LC_PAPER=en_IN LC_NAME=C LC_ADDRESS=C
[10] LC_TELEPHONE=C LC_MEASUREMENT=en_IN LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] bio3d_2.4-1
loaded via a namespace (and not attached):
[1] compiler_3.4.4 magrittr_1.5 tools_3.4.4 parallel_3.4.4
[5] igraph_1.2.5 Rcpp_1.0.4.6 grid_3.4.4 pkgconfig_2.0.3
[9] lattice_0.20-35
Can you print the error message? Make sure you have installed PyMol properly. One way to quickly check is to run PyMol from the Linux command line (not within an R session).