No input PDB file found: check filename >

[imren bayil]

Hi,ı am new user for bio3d ,I am trying to load my pdf file and dcd file,

dcdfile <- system.file("R/new1.dcd", package = "bio3d")

pdbfile <- system.file("R/step3_input.pdb", package="bio3d") then,dcd <- read.dcd(dcdfile)
Error in read.dcd(dcdfile) : No input DCD file found with name: What s my wrong ? Could you anybody guide me ?

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[Xinqiu Yao]

Hi,

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If you are reading your own files, you don’t need “system.file()” (that is for using files shipped with the bio3d package). Simply call

dcd <- read.dcd("R/new1.dcd")

and

pdb <- read.pdb("R/step3_input.pdb").

[Xinqiu Yao]

Not a bug.