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Issues (1–25 of 34)

Title T P Status Votes Assignee Version Created Updated Actions
#530: legend box in overlap analysis
ToDo
enhancement minor resolved
#635: Error Loading DCD file
ToDo
bug minor resolved
#506: Error in flucts[i, ] <- all.modes[[i]]$fluctuations :
ToDo
bug minor resolved
#534: Torsion calculation for PDBs with duplicated resno
ToDo
bug minor resolved
#215: get.seq: Resource temporarily unavailable (4).
ToDo
bug minor resolved
#444: Ionic pairs within protein
ToDo
enhancement minor resolved
#450: pdb object
ToDo
bug minor resolved
#296: hmmer() and blast() output
ToDo
task minor resolved
#406: Connecting Bio3D to an external program to protonate the protein/ligand
ToDo
task minor resolved 1
#82: sequence has more residues than PDB has Calpha's
ToDo
enhancement minor resolved
#306: Rcpp read.pdb
ToDo
bug minor resolved
#247: Rcpp branch: add lattice parameters in Rcpp version of read.pdb
ToDo
task minor resolved
#127: Large pdb files
ToDo
enhancement minor resolved 1
Bio3D Project
#174: Using EBI SOAP or REST Muscle
ToDo
proposal minor resolved
#202: Progressbar for ncore > 1
ToDo
enhancement minor resolved
#242: PDBML/XML
ToDo
task minor resolved
#343: Distance Matrix for antibody with insertion sites (H100A, H100B...)
ToDo
enhancement minor resolved 1
#246: view.xyz() multiple args with con
ToDo
bug minor resolved
#359: read.fasta NA
ToDo
bug minor resolved
Bio3D Project
#366: dssp parsing results in extra residue being added
ToDo
task minor resolved
#301: NA values in contact map while mask.lower=FALSE
ToDo
bug minor resolved
#293: adding R-value and R-free to pdb.annotate()
ToDo
enhancement minor resolved 1
#250: Are there ways to efficiently treat side chains in NMA without using all atoms?
ToDo
proposal minor resolved
#233: PCA-app, tab #4: PCA
ToDo
enhancement minor resolved
#252: igraph 1.0 leads to "error in x$dist operator is invalid for atomic vectors" for cnapath
ToDo
bug minor resolved
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