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Issues (276–300 of 944)

Title T P Status Votes Assignee Version Created Updated Actions
#649: Some questions on RMSF analysis
Q&A
proposal minor resolved
#652: Error in cmdscale(dist(cent), k = k) : NA values not allowed in 'd' for a system with a non-bonded cofactor
Q&A
task minor resolved
#653: Individual PCA plots and colour scheme
Q&A
task major resolved
#654: Tutorial - pdb to RGL conversion for Shiny app
Q&A
proposal minor resolved
#656: PCA on particular residues
Q&A
task trivial resolved
#657: arbitrary labels fof plot.bio3d/plot.fluct?
enhancement minor resolved
#658: struct.aln method does not fully align
enhancement minor resolved
#659: Plot values of principal components (instead proportion of variance)
Q&A
task minor resolved
#660: Unit of the eigenvalues of the PCA
Q&A
task minor resolved
#663: export graph file to Cytoscape
Q&A
enhancement major resolved
#665: How to generate 2D and 3D free energy landscape plots
Q&A
proposal critical closed
#667: Phi/Psi error?
Q&A
task major closed
#668: assign_chain_ID_in_mktrj()
task major resolved
#671: error.in.pymol(modes)
task major resolved
#672: How to read large dcd files; change X-axis to Time (ns); plot secondary structure throughout simulation; plot free energy landscape?
Q&A
task critical new
#674: Increasing the percent identity of similar structures/sequences retrieved using blast.pdb() and hmmer()
Q&A
enhancement minor resolved
#675: Can't generate pdb aligned plot
Q&A
task minor resolved
#677: PCA trajectory analysis
Q&A
task minor resolved
#678: Inter-community couplings
Q&A
task major resolved
#680: PCA for crystal structure and MD simulation
Q&A
task minor resolved
#687: dimension mismatch
Q&A
task minor resolved
#685: Time consuming network analysis
Q&A
task trivial resolved
#683: old version of aaindex? missing some features
ToDo
task minor new
#662: Error in pdb$atom : $ operator is invalid for atomic vectors
bug major resolved
#670: torsion.pdb with proline
Q&A
bug major resolved
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