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Issues (376–400 of 673)

Title T P Status Votes Assignee Version Created Updated Actions
#344: how to plot and extract data from cij and net calculations in a multiple chain protein system
bug major resolved
Bio3D Project
#345: PCA-app, bug related to incresing number of PDBs after visiting ALIGN tab
ToDo
bug major resolved
#330: Searching through protiens (PDB files) with R
Q&A
task major resolved
#328: Help with correlation network analysis
Q&A
task minor resolved
#285: Error in plot.dccm when pdb$helix / pdb$sheet = NULL
ToDo
bug trivial resolved
#336: read.ncdf: incorrect number of dimensions when reading a single frame and at.sel is not null
ToDo
bug major resolved
#337: reading multiple PDB files with Bio3D
Q&A
bug major resolved
#334: while calculating dccm, i found the error: cannot allocate vector of size 69.7 Gb
Q&A
task trivial resolved
Bio3D Project
#331: xyz coordinates
task trivial resolved
#326: Give up trying to find out how to extract average structure,,
Q&A
task minor resolved
#329: how to convert DCD file into CSV file
Q&A
task trivial resolved
#321: Distance Matrix Units
Q&A
task trivial resolved
Bio3D Project
#323: clustering analysis on molecular dynamics data:
Q&A
task trivial resolved
#324: Help with calculating angles between atoms
Q&A
task trivial resolved
Bio3D Project
#319: read in multiple dcd from NAMD
Q&A
task major resolved
Bio3D Project
#322: Help with loading of multiple replica simulations
task major resolved
#325: Error in cmdscale(dist(cent), k = k) : NA values not allowed in 'd'
bug minor resolved
#320: order trajectory .dcd files
Q&A
task major resolved
Bio3D Project
#313: PCA-app FIT contact map core option
bug major resolved
#317: is view.cna in the documentation actually vmd.cna?
Q&A
task trivial resolved
#318: get.seq() cannot download multiple sequences
bug major resolved
#315: Problem with dccm()
bug minor resolved
#316: Slow cna() -- too slow?
task trivial resolved
#314: dssp error
bug major resolved
#310: ncdf update to ncdf4 or RNetCDF
ToDo
task major resolved
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