1. Bio3D Project Avatar Bio3D Project
  2. Bio3D
  3. bio3d

Issues

Filter by:

Advanced search

Issues (51–75 of 75)

Title T P Status Votes Assignee Version Created Updated Actions
#707: covariance matrix for normal mode analysis
ToDo
enhancement minor new
#692: Multiple Chain PDB split duplication error
ToDo
enhancement major new
#652: Error in cmdscale(dist(cent), k = k) : NA values not allowed in 'd' for a system with a non-bonded cofactor
Q&A
task minor resolved
#669: RNA pdbaln
ToDo
proposal major new
#637: seqaln() without external muscle
ToDo
proposal major new
#581: Typo in the tutorial webpage
ToDo
task minor new
#592: Deformation Energies from MD Trajectories
ToDo
proposal minor new
#568: All-atom NMA algorithm and scoring function?
Q&A
task major resolved
#570: Score calculations normal modes (SIP,RMSIP)
Q&A
task major resolved
#514: how to save dataset of PCA
Q&A
task blocker resolved
#454: PLS-DA
ToDo
proposal minor new
#457: Statistical Coupling Analysis
ToDo
proposal minor new
#438: Q: How to calculate RMSF for specific residues
Q&A
task major resolved
#415: Model selection (suggestion)
proposal minor resolved
#296: hmmer() and blast() output
ToDo
task minor resolved
#249: What are the units for mode frequencies in Bio3dNMA?
ToDo
proposal trivial new
#201: plot.dccm axes labels
ToDo
enhancement minor new
#186: Integrate view() family functions for interactive 3D structure visualization
ToDo
enhancement major new
#146: option for customized margin segments in plot.bio3d
ToDo
enhancement minor new
#342: hmmer() start/end domain in output?
ToDo
enhancement minor new 1
#133: Would you consider adding SASA measuring capability in Bio3d?
ToDo
enhancement minor new 1
#208: Support of 'enma' in view.modes()
ToDo
task minor new
#200: aln2plot(): New function for alignment plotting
ToDo
proposal major new 1
#197: pca.xyz
ToDo
task trivial new 1
#118: Contact map and significant atom-atom contact formation
ToDo
enhancement trivial new
  2. 1
  3. 2
  4. 3