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Issues (76–100 of 395)

Title T P Status Votes Assignee Version Created Updated Actions
#841: How to project crystal structure onto PCA plot
task major closed
#864: How to save figures/plots from R Graphics window
ToDo
task major resolved
#865: writing atomic fluctuations in csv format
task major resolved
#866: ClusPro output pdb file gives read.pdb error
Q&A
bug major resolved
#868: calling and location of dssp
Q&A
bug major resolved
#870: thickness of RMSF plot
enhancement major new
#867: Comparison of the degree of collectivity of motions amongst proteins in a dataset
enhancement major new
#863: Calculating Center of Mass of a protein and the corressponding displacement over the entire MD trajectory
Q&A
task major resolved
#832: Memory limitations with all-atom NMA
bug major new
#852: GeoStaS and Residue Cross Correlation: Clarifications needed
enhancement major new
#851: Function for calculating TM-scores
enhancement major new
#847: Question about domain analysis with GeoStaS
Q&A
task major new
#833: mean RMSF calculation for protein ensembles
Q&A
task major new
#840: How to extract data from PCA?
Q&A
task major resolved
#838: How to extract data from PCA?
Q&A
bug major closed
#839: How to extract data from PCA?
Q&A
bug major closed
#834: issue in installation of "bio3d-geostas” and “bio3d-nma” packages
ToDo
task major resolved
#829: Calculation killed when running conservation calcultions on large fasta files
task major new
#828: Calculation killed when running conservation calcultions on large fasta files
Q&A
bug major new
#827: .format_tbl() in pdb.annotate() cannot handle "source" with no value
ToDo
bug major resolved
#518: Employing consistent communities in network analsis for direct comparison between systems
Q&A
proposal major resolved 2
#819: eNMA object: obtaining fluctuations from a subset of modes
Q&A
enhancement major new
#793: read.dcd(big = TRUE) Error
bug major new
#768: Calculation of 'significantly' stronger correlation couplings in CNA
Q&A
task major closed
#770: MD trajectories analysis on cross correlation network analysis and PCA clustering memory issues
Q&A
task major closed
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