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Issues (101–125 of 267)

Title T P Status Votes Assignee Version Created Updated Actions
#406: Connecting Bio3D to an external program to protonate the protein/ligand
ToDo
task minor resolved 1
#397: pdbsplit stalls with ncore > 1
bug minor resolved
#398: Calculating cluster centroid structure
task minor resolved
#82: sequence has more residues than PDB has Calpha's
ToDo
enhancement minor resolved
#306: Rcpp read.pdb
ToDo
bug minor resolved
#247: Rcpp branch: add lattice parameters in Rcpp version of read.pdb
ToDo
task minor resolved
#127: Large pdb files
ToDo
enhancement minor resolved 1
Bio3D Project
#382: Extracting Binding Site Residues for Multiple PDB Files using Bio3D
Q&A
task minor resolved
Bio3D Project
#174: Using EBI SOAP or REST Muscle
ToDo
proposal minor resolved
#202: Progressbar for ncore > 1
ToDo
enhancement minor resolved
#242: PDBML/XML
ToDo
task minor resolved
#343: Distance Matrix for antibody with insertion sites (H100A, H100B...)
ToDo
enhancement minor resolved 1
#392: asking for multiple CPUs
task minor resolved
#246: view.xyz() multiple args with con
ToDo
bug minor resolved
#379: PCA for user-defined binding site
task minor resolved
#388: DCCM (dccm.xyz.R and cov2dccm.R) - Mean substraction
Q&A
task minor resolved
#389: Use pdbfit() to an specific range of residues.
Q&A
task minor resolved
#371: network analysis with conserved water molecules
Q&A
task minor resolved
Bio3D Project
#376: Viewing AMBER NetCDF .nc output files
task minor resolved
#243: Problem when loading NetCDF trajectories
Q&A
bug minor resolved
#372: The eigenvectors in pca object: row or column arranged?
proposal minor resolved
#359: read.fasta NA
ToDo
bug minor resolved
Bio3D Project
#368: Error while running mktrj.enma() on aanma.pdbs() output object
bug minor resolved
#366: dssp parsing results in extra residue being added
ToDo
task minor resolved
#362: Can be extracted the conformer list for any PC?
Q&A
task minor resolved
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