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Issues (176–200 of 267)

Title T P Status Votes Assignee Version Created Updated Actions
#210: atom select over trajectory
Q&A
task minor resolved
#168: How to use Bio3D to carry out a cluster and Principal Components analysis (PCA) of DNA structures
ToDo
enhancement minor resolved
Bio3D Project
#190: error using nma.pdbs()
Q&A
bug minor resolved
#198: How to get per residue rmsf including side chain contributions?
Q&A
task minor resolved
#206: Unable to launch Muscle package from pdbaln() function.
Q&A
task minor resolved
#204: SSE with trim.pdb
bug minor resolved
#205: seqaln does not properly detect clustalo using exefile
bug minor resolved
#203: Installing Bio3d on Ubuntu 14.04
Q&A
task minor resolved
#188: selecting representative side chain atoms using atom.select
Q&A
task minor resolved
#193: nma.pdbs() extension to include other ff terms
Q&A
proposal minor resolved
#192: pdbsplit() action
Q&A
proposal minor resolved
#139: A more general function doing similar fluctuation plot as plot.enma()
proposal minor resolved
#141: Please build vignette for pdb structure manipulation
enhancement minor resolved
Bio3D Project
#191: using the cmap function
Q&A
task minor resolved
#164: Understanding the output from view.cnapath()
task minor resolved
#43: Create a data file for residue/value mappings
enhancement minor resolved
#162: Q&A: Question about bio3d CNA
task minor resolved
#180: Integrating normal mode analysis and correlation network
bug minor resolved
#98: multiple calls to setup.ncore()
bug minor resolved
#171: Suggestions for cat.pdb()
proposal minor resolved
#169: protein-DNA complex pdbaln() possible?
proposal minor resolved
#175: Is it possible to do charge and/or hydrophobicity analysis of multiple aligned sequences in Bio3d?
enhancement minor resolved
#125: RNA structures with core.find()
proposal minor resolved
#144: issue with comparing MD PCs and X-ray PCs
task minor resolved
#156: memory issue with bio3d
bug minor resolved
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