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Issues (1–25 of 38)

Title T P Status Votes Assignee Version Created Updated Actions
#970: Bhattacharyya coefficient calculations returning NAs
bug major open
#448: Very slow cna(cij) calculation
ToDo
enhancement major new 1
#920: How to implement elbow method for clustering to find the optimal K and how to generate a sorted table of eigenvalues with eigenvectors?
Q&A
task major new
#921: blast.pdb does not return the PDBids of PDBs with identical sequences (so called "identical proteins" by NCBI) present in the PDB database.
Q&A
bug major new
#917: I convert my pdb to charmm and get hydrogens removed
bug major new
#876: Is it possible to calculate RoG from a MD trajectory file?
Q&A
task major resolved
#912: Functions to easily extract various info from aa.index
enhancement major new
#910: Find PFAM annotations of PDB entries error
ToDo
bug major new
#718: vmd.cna error
ToDo
task major new
#898: Not possible to read.pdb('1ao7.pdb2", multi = TRUE)
ToDo
bug major new
#893: communities not colored on the struct and struct is not tube, VMD
bug major new
#886: Importing DCCM and plotting
Q&A
task major new
#755: Convert.pdb incorrectly assesses chain when converting helix/sheet
bug major resolved
#849: pdb.annotate error
bug major resolved
#866: ClusPro output pdb file gives read.pdb error
Q&A
bug major resolved
#868: calling and location of dssp
Q&A
bug major resolved
#863: Calculating Center of Mass of a protein and the corressponding displacement over the entire MD trajectory
Q&A
task major resolved
#793: read.dcd(big = TRUE) Error
bug major new
#768: Calculation of 'significantly' stronger correlation couplings in CNA
Q&A
task major closed
#717: geostas stalls at core.find
bug major resolved
#786: pdb.annotate not working?
ToDo
bug major resolved
#796: Unable to run cna process
Q&A
bug major closed
#812: NMA Anaysis
Q&A
enhancement major new
#805: read.pdb issue
Q&A
bug major resolved
#789: Installing error in the Bio3D family
Q&A
bug major resolved
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