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Issues (1–25 of 384)

Title T P Status Votes Assignee Version Created Updated Actions
#771: atom selection for nucleic acid residues
ToDo
task minor closed
#761: Reading in Fasta Sequence for PCA and NMA
task minor closed
#751: Calculate Mainchain and Sidechain Torsion/Dihedral Angles
Q&A
task minor closed
#787: fail to run "read.pdb"
Q&A
task minor closed
#791: Unable to run stride function
task minor closed
#795: pca.project doesn't work if structures to project are smaller than those used to make the pca
Q&A
task minor closed
#681: correlation analysis
Q&A
task minor closed
#643: Error in dssp.pdb(pdb) - unhelpful error message
Q&A
proposal minor closed
#676: failure to find temporary file when using stride()
bug minor closed
#199: Related to issue #198 rmsf per residue
ToDo
task minor closed
#185: Test: some feature request
ToDo
proposal minor closed 1
#304: PCA-app, No corresponding PDB files found
bug minor on hold
#367: How to plot the mode arrows stucture pictures with the pca object
enhancement minor resolved
#889: How to calculate distance matrix between two chain in a single PDB file?
Q&A
proposal minor resolved
#720: hmmscan error
bug minor resolved
#815: problem in loading dcd file
task minor resolved
#837: Could you tell me how to change community spheres radius in community network analysis?
task minor resolved
#831: how to get the protein structure with PC values projection on trajectory
Q&A
task minor resolved
#830: Failure to retrieve annotations for some PDBs using pdb.annotate
bug minor resolved
#826: How to calculate RMSD and binding energy from the already docked ligand-receptor
Q&A
task minor resolved
#853: How to extract part of protein complex with two molecules with Bio3D
Q&A
enhancement minor resolved
#844: Prof.
task minor resolved
#843: pdb annotate
bug minor resolved 1
#869: Output from pca analysis
bug minor resolved
#99: Deformation energies after ensemble NMA
enhancement minor resolved
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