Commits

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Author Commit Message Labels Comments Date
Piotr Dworzynski
Fixed error in fdr calculation and added a random comment
Piotr Dworzynski
first implementation
Piotr Dworzynski
Some basic structure
Piotr Dworzynski
Changed default verbosity values
Piotr Dworzynski
added a random sets size permutation script using CBS queue
Piotr Dworzynski
Merge branch 'master' of bitbucket.org:HeyHo/ibas
Piotr Dworzynski
Printing out of histogram data in the wrapper
Piotr Dworzynski
Merge branch 'master' of bitbucket.org:HeyHo/ibas
Piotr Dworzynski
Removed 10k from the calculations, updated printouts which now depend on logging option, added script which preppends ensembl and hugo gene symbols to output
Piotr Dworzynski
Added num_cv_genes ooption to wrapper
Piotr Dworzynski
Merge branch 'master' of bitbucket.org:HeyHo/ibas
Piotr Dworzynski
Added email error handling, some website tweaks
Piotr Dworzynski
Merge branch 'master' into string_id
Piotr Dworzynski
Fixed wrong set AAUC's
Piotr Dworzynski
Fixed problem with 0 Likelihood ratios if gene score very well
Piotr Dworzynski
number of cv genes is read from config
Piotr Dworzynski
Added number of cv reference genes as an option
Piotr Dworzynski
First compiled attempt
Piotr Dworzynski
Removed unnecessary std printouts
Piotr Dworzynski
Merge branch 'cvmodel' of bitbucket.org:HeyHo/ibas
Piotr Dworzynski
Some small change
Piotr Dworzynski
Merged upstream changes from master
Piotr Dworzynski
Added new set raw data file postprocessing
Piotr Dworzynski
Adde set pvalues calculation
Piotr Dworzynski
Fixed set output numbering
Piotr Dworzynski
Fixed set output trailing comma and layout
Piotr Dworzynski
Printouts of diagnostic messages
Piotr Dworzynski
Added new kernel output file containing gene statistics, gene statistics class
Piotr Dworzynski
Merge branch 'master' of bitbucket.org:HeyHo/ibas
Piotr Dworzynski
Added a new pvalue calculating script for KAsper data, updated wrapper
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