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Piotr Dworzynski
Makefile for cge-s2 at CBS
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1.0
Piotr Dworzynski
Further small changes to Makefiles
Piotr Dworzynski
Merge branch 'master' of bitbucket.org:HeyHo/ibas
Piotr Dworzynski
Cleaned up x86 makefiles
Piotr Dworzynski
Cleaned up x86 makefiles
Piotr Dworzynski
Merged boost-program_options into master, IBAS needs boost program options library now
Piotr Dworzynski
Merge branch 'boost_program_options' of bitbucket.org:HeyHo/ibas into boost_program_options
Piotr Dworzynski
Changed output formatting and added model header according to Kasper's and Tune's specs
Piotr Dworzynski
Added Makefile for Broad
Piotr Dworzynski
Updated Makefile for mac, still won't build due to bug in g++ for mac
Piotr Dworzynski
Changed column names, models will print gene symbols, removed non-empyrical p-value from display
Piotr Dworzynski
Forgot to add new verbosity setting to example config
Piotr Dworzynski
updated example config file
Piotr Dworzynski
Removed raw_status file printout - used to track progress for web version
Piotr Dworzynski
First installment of new output scheme
Piotr Dworzynski
Added HGNC and ENS readers and processing
Piotr Dworzynski
Made ibas self inclusive without external dependencies other than boost, got rid of project config - using boost::program_options now
Tune Pers
Make file for the BROAD
Piotr Dworzynski
Test program_options implementation, won't work on mac with g++ from macports... f@##....
Piotr Dworzynski
Using program_options library
Piotr Dworzynski
Boost::assign instead of arrays for network interaction threshold and order vectors
Piotr Dworzynski
Moved the uspecified-value-define into a separate file so as to clean tons of warnings during compilation
Piotr Dworzynski
Mac Makefile: Set use of g++ instead of clang, added IbasGeneSet as an object
Piotr Dworzynski
Merge branch 'fdr_calculation'
Piotr Dworzynski
Fixed error in fdr calculation and added a random comment
Piotr Dworzynski
first implementation
Piotr Dworzynski
Some basic structure
Piotr Dworzynski
Changed default verbosity values
Piotr Dworzynski
added a random sets size permutation script using CBS queue
Piotr Dworzynski
Merge branch 'master' of bitbucket.org:HeyHo/ibas
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