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License Information

JStruct License

JStruct is an open source stand-alone software tool under development by Just Biotherapeutics for the storage and retrieval of public and proprietary three-dimensional macromolecular structures. The core information stored in JStruct is the three-dimensional macromolecular structure files, as well as information parsed from their content.

JStruct allows for the storage of public structure files in-house along with internally developed structure files, and also provides a means to store, access, search, and utilize both public and proprietary structures within the same system while allowing for security across the system. Setting up a robust internal structure repository allows searches, calculations, comparisons, etc. to be performed across a full set of files regardless of their source, and keeps internal sequences from being externally exposed.

Copyright (C) 2016 Just Biotherapeutics, Inc.

Just Biotherapeutics, Inc.

401 Terry Avenue North, Seattle WA 98109


  • This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.

  • This program is distributed "as is" in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.

  • You should have received a copy of the GNU General Public License along with this program. If not, see

JStruct incorporates the following components without modification, and may be used only in compliance with all applicable licenses.

Third-party Licenses (open source software used by JStruct)

Library Version License(s)
Apache Commons 1.20 Apache 2.0
CoreStruct 1.20 GNU GPL v3.0
Google API Client Library for Java 1.20 Apache 2.0
Hibernate 5.2 LGPL v2.1
HikariCP 2.5 Apache 2.0
JUnit 4.12 Eclipse Public License 1.0
Jackson JSON Processor 2.1.3 Apache 2.0
Java Hamcrest 1.3 BSD License
JavaMail API 1.5.4 GNU General Public License (GPL) v2 with Classpath Exception; Common Development and Distribution License (CDDL) v1.1
Joda-Time 2.4 Apache 2.0
Jsoup 1.10 MIT
Maven 3.3 Apache 2.0
NGL Viewer MIT
PostgreSQL JDBC Driver 9.4 BSD License
PrimeFaces 6 Apache 2.0
Quartz 2.2 Apache 2.0
SAX (Simple API for XML) 2 Public Domain
com-hfg GNU Library or Lesser General Public License version 3.0; GNU Library or Lesser General Public License version 2.0
cron-parser 2.9 MIT
javax-servlet 1.2 Common Development and Distribution License (CDDL) Version 1.0
log4j 1.2 Apache 2.0
startools 0.2 'BSD-like license'