ERROR:vcontact2: Could not find Diamond in $PATH. ERROR:vcontact2: Could not find MCL (specifically mcxload) in $PATH. INFO:vcontact2: Identified 20 CPUs INFO:vcontact2: Using reference database: ProkaryoticViralRefSeq201-Merged INFO:vcontact2: Output directory vContactOut created. INFO:vcontact2: Merging ProkaryoticViralRefSeq201-Merged to user sequences... INFO:vcontact2: Creating Diamond database and running Diamond... INFO:vcontact2.protein_clusters: Creating Diamond database... Traceback (most recent call last): File "/srv/home/acisneros/bin/miniconda2/envs/vContact2/bin/vcontact2", line 757, in main(options) File "/srv/home/acisneros/bin/miniconda2/envs/vContact2/bin/vcontact2", line 374, in main db_fp = vcontact2.protein_clusters.make_diamond_db(proteins_aa_fp, output_dir, cpus) File "/srv/home/acisneros/bin/miniconda2/envs/vContact2/lib/python3.8/site-packages/vcontact2/protein_clusters.py", line 77, in make_diamond_db res = subprocess.run(make_diamond_cmd, check=True, stdout=subprocess.PIPE) File "/srv/home/acisneros/bin/miniconda2/envs/vContact2/lib/python3.8/subprocess.py", line 493, in run with Popen(*popenargs, **kwargs) as process: File "/srv/home/acisneros/bin/miniconda2/envs/vContact2/lib/python3.8/subprocess.py", line 858, in __init__ self._execute_child(args, executable, preexec_fn, close_fds, File "/srv/home/acisneros/bin/miniconda2/envs/vContact2/lib/python3.8/subprocess.py", line 1704, in _execute_child raise child_exception_type(errno_num, err_msg, err_filename) FileNotFoundError: [Errno 2] No such file or directory: 'diamond'