1. MAVERIC-Lab Avatar MAVERIC-Lab
  2. vContact
  3. vcontact2

Issues

Filter by:

Advanced search

Issues (1–25 of 93)

Title T P Status Votes Assignee Created Updated Actions
#32: Method to reduce needed memory when running a huge file
bug major on hold
#22: To generate a taxonomic count table
proposal major on hold
#15: vcontact freezes at "Building the cluster and profiles" step
bug major on hold
#4: Memory Error
bug major on hold
#36: ERROR:vcontact2: Error in contig clustering ERROR:vcontact2: No columns to parse from file
bug major resolved
#16: ERROR:vcontact2: 'DataFrame' object has no attribute 'ix'
bug major resolved
#101: TypeError: stat: path should be string, bytes, os.PathLike or integer, not NoneType
bug major resolved
#93: TypeError: 'numpy.float64' object cannot be interpreted as an integer
bug major resolved
#87: Error in protein module computation
bug major resolved
#57: "Error in identifying excluded genomes"
bug major resolved 2
#21: ERROR:vcontact2: No columns to parse from file
bug major resolved
#67: Error in contig clustering 'DataFrame' object has no attribute 'ix'
bug major resolved
#77: vcontact2: Error in contig clustering 'nan'
bug major resolved
#54: ERROR:vcontact2: Could not find Diamond in $PATH.
bug major resolved 2
#49: Extent of planned update?
enhancement major resolved
#59: relationship of reference database with ICTV
bug major resolved
#75: Which database and taxonomy does the parameter "ProkaryoticViralRefSeq207-Merged" means ?
bug major resolved
#66: ERROR:vcontact2: Unable to identify file format for viral_genomes_g2g.
bug major resolved
#70: "pandas.errors.ParserError"
bug major resolved
#68: question about genome_by_genome_overview.csv file
bug major resolved
#43: How to get RefSeq201?
bug major resolved
#27: error during vcontact2 run
bug major resolved
#45: Error in viral clusters
bug major resolved
#33: question about VC Subcluster
bug major resolved
#24: pandas.errors.EmptyDataError: No columns to parse from file
bug major resolved
  2. 1
  3. 2
  4. 3
  5. 4