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Link Text# LPPtiger related files #

This repository contains the related files of LPPtiger project.

  • Lipid oxidation pathways in SBML format
  • List of phospholipids used for in silico oxidation by LPPtiger in .xlsx format
  • in silico predicted lipid peroxidation products (LPPs) libraries in sdf format
  • in silico fragmented tandem mass spectra libraries of in silico predicted LPPs in msp format
  • Summary tables of in silico predicted LPPs in .xlsx format
  • Summary tables of unique sn1 and sn2 residues of in silico predicted LPPs in .xlsx format

The predicted structures and corresponding spectra were generated using LPPtiger using level 1 oxidation with maximum 3 modification sites with the prostanes prediction function enabled.

Instructions

Please navigate to the Source page of this repository or go to https://bitbucket.org/SysMedOs/filesrepository/src to access the files:

The lipid oxidation pathways are stored under SBML folder.

Corresponding images in jpg format are stored under SBML/SBML_JPG folder.

Lists of phospholipids used for in silico oxidation by LPPtiger are stored directly under in-silico-oxidation folder.

The in silico predicted files are stored in sub-folders under in-silico-oxidation folder organized by phospholipids classes.

Note: You can navigate to the Downloads page and click Download repository to download all files as a zip package. https://bitbucket.org/SysMedOs/filesrepository/downloads/

Recommended software

We recommend to use following software to process the files in this repository.

License

Further questions?

Fundings

We acknowledge all projects that supports the development of LPPtiger: