GALAXY ====== http://galaxyproject.org/ The latest information about Galaxy is always available via the Galaxy website above. HOW TO START ============ Galaxy requires Python 2.5, 2.6 or 2.7. To check your python version, run: % python -V Python 2.4.4 Start Galaxy: % sh run.sh Once Galaxy completes startup, you should be able to view Galaxy in your browser at: http://localhost:8080 You may wish to make changes from the default configuration. This can be done in the universe_wsgi.ini file. Tools are configured in tool_conf.xml. Details on adding tools can be found on the Galaxy website (linked above). Not all dependencies are included for the tools provided in the sample tool_conf.xml. A full list of external dependencies is available at: http://wiki.g2.bx.psu.edu/Admin/Tools/Tool%20Dependencies
9a73c69 - merged with latest changes of galaxy central with working directory
dd8a939 - Update datatypes conf sample to include bedgraph to bigwig converter.
f0e26a4 - Output sorted BAM from Bowtie2.
695159a - Remove blast tools and test data from the distribution, update tool_conf.xml.sample to reflect this.
bf6517b - name change: _BX main_ browser -> _BX_ table browser
863e115 - Add data placeholders so that BED files without all optional fields can be dynamically filtered.
931382e - Refactor GBrowse external display application. Update WormBase with latest builds and to be able to use reference sites.
7eeee80 - Better handling of invalid dynamic external display application links.
9df1265 - Rename an ObjectStore method not to be AWS-specific
8c07fc1 - Merge