PTMOracle is a Cytoscape app that facilitates the co-visualisation and co-analysis of post-translational modifications (PTMs) in the context of protein-protein interaction (PPI) networks. It allows users to develop systematic searches for proteins of interest and explore network visualisations that address complex PTM-associated relationships.
Please feel free to browse any of the following documentation:
- Application Description (under construction)
- Quick Start
- User Manual
- File Formats
- Patch Notes
- Future Work
The source codes are licensed under GPL less public licence. Users can contribute by making comments on the issues tracker, the wiki or direct contact via e-mail (see below).
For more information, please refer to the following article:
PTMOracle: A Cytoscape App for Covisualizing and Coanalyzing Post-Translational Modifications in Protein Interaction Networks
Aidan P. Tay, Chi Nam Ignatius Pang, Daniel L. Winter, and Marc R. Wilkins
Journal of Proteome Research, 2017, 16(5), 1988-2003
Aidan Tay: email@example.com