Welcome

About me

I am a biological computerologist working on problems in computational biology.
I maintain a home page here

Projects

Bitbucket repositories of some projects I am/have been involved in: * Samar: speedy, assembly-free differential gene expression analysis for non-model organisms https://bitbucket.org/project_samar/samar

• Pipeline for 2-factor RNA-seq based gene expression analysis (as applied to S. serrata data) https://bitbucket.org/s_serrata/dge

• Split-alignments of paired-end reads:
  https://bitbucket.org/splitpairedend/last-split-pe/wiki/Home

• Joint read alignment:
  https://bitbucket.org/jointreadalignment/jra-src/wiki/Home

• Handling a large sample of RNA secondary structures using binary decision diagrams:
  https://bitbucket.org/rssdd/rssdd/wiki/Home