importargparseimportrequestsimportsysURL="https://biosig.lab.uq.edu.au/dynamut2/api/prediction_mm"defmain(args):pdb_file=args.pdb_filemutations_list=args.mutations_listfiles_to_submit={"pdb_file":open(pdb_file,"rb"),"mutations_list":open(mutations_file,"rb")}req=requests.post(URL,files=pdb_to_submit)print(req.json())returnTrueif__name__=="__main__":parser=argparse.ArgumentParser(description='Job submission for single prediction - DynaMut2')parser.add_argument('--pdb_file',dest='pdb_file',type=str,help='PDB file',required=False,default=None)parser.add_argument('--mutations_list',dest='mutations_list',type=str,help='Mutation list file. One entry per line. Mutations must be separated by a semi-colon (;). E.g.: A E346K;A T118P')args=parser.parse_args()ifargs.pdb_file==None:print('usage: main.py [-h] [--pdb_file PDB_FILE]')print('[--mutations_list MUTATION]')print('main.py: error: missing arguments: Please provide --pdb_file')sys.exit(1)main(args)
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