Internal Server Error when running oncodriveFML via online interface

Issue #33 new
Sam El-Kamand created an issue

First things first, thanks for your work on this fantastic tool!

I just wanted to report a potential bug with the online version of oncodriveFML.

When I try to run the attached file through your website at http://bbglab.irbbarcelona.org/oncodrivefml/home# with the file above, I see the following error.

500 Internal Server Error
The server encountered an unexpected condition which prevented it from fulfilling the request.
Traceback (most recent call last):
  File "/usr/local/lib/python3.8/site-packages/cherrypy/_cprequest.py", line 638, in respond
    self._do_respond(path_info)
  File "/usr/local/lib/python3.8/site-packages/cherrypy/_cprequest.py", line 690, in _do_respond
    self.body.process()
  File "/usr/local/lib/python3.8/site-packages/cherrypy/_cpreqbody.py", line 982, in process
    super(RequestBody, self).process()
  File "/usr/local/lib/python3.8/site-packages/cherrypy/_cpreqbody.py", line 559, in process
    proc(self)
  File "/usr/local/lib/python3.8/site-packages/cherrypy/_cpreqbody.py", line 225, in process_multipart_form_data
    process_multipart(entity)
  File "/usr/local/lib/python3.8/site-packages/cherrypy/_cpreqbody.py", line 217, in process_multipart
    part.process()
  File "/usr/local/lib/python3.8/site-packages/cherrypy/_cpreqbody.py", line 557, in process
    self.default_proc()
  File "/usr/local/lib/python3.8/site-packages/cherrypy/_cpreqbody.py", line 717, in default_proc
    self.file = self.read_into_file()
  File "/usr/local/lib/python3.8/site-packages/cherrypy/_cpreqbody.py", line 731, in read_into_file
    fp_out = self.make_file()
  File "/usr/local/lib/python3.8/site-packages/cherrypy/_cpreqbody.py", line 513, in make_file
    return tempfile.TemporaryFile()
  File "/usr/local/lib/python3.8/tempfile.py", line 614, in TemporaryFile
    (fd, name) = _mkstemp_inner(dir, prefix, suffix, flags, output_type)
  File "/usr/local/lib/python3.8/tempfile.py", line 250, in _mkstemp_inner
    fd = _os.open(file, flags, 0o600)
FileNotFoundError: [Errno 2] No such file or directory: '/tmp/tmpqfchm7a6'

This same file works with oncodriveCLUSTL.

Apologies if this is the wrong spot for this, since its concerned with the web version!

Thanks again

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