Internal Server Error when running oncodriveFML via online interface
Issue #33
new
First things first, thanks for your work on this fantastic tool!
I just wanted to report a potential bug with the online version of oncodriveFML.
When I try to run the attached file through your website at http://bbglab.irbbarcelona.org/oncodrivefml/home# with the file above, I see the following error.
500 Internal Server Error
The server encountered an unexpected condition which prevented it from fulfilling the request.
Traceback (most recent call last):
File "/usr/local/lib/python3.8/site-packages/cherrypy/_cprequest.py", line 638, in respond
self._do_respond(path_info)
File "/usr/local/lib/python3.8/site-packages/cherrypy/_cprequest.py", line 690, in _do_respond
self.body.process()
File "/usr/local/lib/python3.8/site-packages/cherrypy/_cpreqbody.py", line 982, in process
super(RequestBody, self).process()
File "/usr/local/lib/python3.8/site-packages/cherrypy/_cpreqbody.py", line 559, in process
proc(self)
File "/usr/local/lib/python3.8/site-packages/cherrypy/_cpreqbody.py", line 225, in process_multipart_form_data
process_multipart(entity)
File "/usr/local/lib/python3.8/site-packages/cherrypy/_cpreqbody.py", line 217, in process_multipart
part.process()
File "/usr/local/lib/python3.8/site-packages/cherrypy/_cpreqbody.py", line 557, in process
self.default_proc()
File "/usr/local/lib/python3.8/site-packages/cherrypy/_cpreqbody.py", line 717, in default_proc
self.file = self.read_into_file()
File "/usr/local/lib/python3.8/site-packages/cherrypy/_cpreqbody.py", line 731, in read_into_file
fp_out = self.make_file()
File "/usr/local/lib/python3.8/site-packages/cherrypy/_cpreqbody.py", line 513, in make_file
return tempfile.TemporaryFile()
File "/usr/local/lib/python3.8/tempfile.py", line 614, in TemporaryFile
(fd, name) = _mkstemp_inner(dir, prefix, suffix, flags, output_type)
File "/usr/local/lib/python3.8/tempfile.py", line 250, in _mkstemp_inner
fd = _os.open(file, flags, 0o600)
FileNotFoundError: [Errno 2] No such file or directory: '/tmp/tmpqfchm7a6'
This same file works with oncodriveCLUSTL.
Apologies if this is the wrong spot for this, since its concerned with the web version!
Thanks again