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  2. Oncodrive
  3. OncodriveFML

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Issues (1–25 of 29)

Title T P Status Votes Assignee Created Updated Actions
#191: Update list of ensembl genes for assigning names to ENS IDs
bug major new
#190: Improve documentation of the signature file approach
task major new
#30: Server HTTP failure to get reference genome
bug major new
#33: Internal Server Error when running oncodriveFML via online interface
bug major new
#32: oncodrivefml specifications found to be in conflict
bug major new
#31: Using OncodriveFML in mouse whole-exome sequencing data
proposal major new
#29: AttributeError: 'generator' object has no attribute 'items'
bug major new
#26: System-specific installation issues (and possible solution?)
bug major new
#28: Error: AttributeError: 'generator' object has no attribute 'items'
bug major new
#25: Erro
bug major new
#23: error when running oncodrivefml
bug major new
#18: Impossible output, way more muts than it should
bug major new
#15: ERROR:bgdata.downloader:Error while extracting
bug major new
#3: Triplet NAA not found
bug major new
#5: expected P value for the output tsv file
enhancement major new 1
#22: Update version
task major resolved
#24: Infinite warning messages
bug major resolved
#20: CADD score 1.5
enhancement major resolved
#16: Update pandas in requirements
bug major resolved
#2: new conda recipe
proposal major resolved 1
#7: Missing stops file
bug major resolved
#11: Pandas warning
enhancement major resolved
#9: Signature complementaries
task major resolved
#14: Missing tabix index
bug major resolved
#13: Fix pytabix version
bug major resolved 1
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