berkeleylab / CheckV / issues

Title	T	P	Status	Votes	Assignee	Created	Updated
#104: Is it possible to trim host flanking contamination rather than remove the contig entirely?	task	minor	resolved			2023-05-31	2024-02-17
#109: RNA viruses	task	critical	resolved			2023-09-09	2024-02-17
#105: Host vs. viral genes?	task	major	resolved			2023-06-27	2024-02-17
#99: DIAMOND task failed. Program should be rerun. - Log file is empty	task	major	resolved	1		2023-01-05	2024-02-04
#110: how to merge multiple samples to get mergeed.fna ?	task	major	resolved			2023-10-25	2023-10-28
#71: How to run Checkv on prospective viral MAGs?	task	trivial	resolved			2022-01-05	2023-05-24
#50: Contig >1.5x longer than expected genome length	task	trivial	resolved			2021-07-06	2023-03-01
#7: Request: please add Git tags for releases	task	major	resolved			2020-06-18	2022-05-11
#69: complete_genomes.tsv empty despite complete genomes	task	trivial	resolved			2021-11-24	2022-05-09
#46: Remove BLAST dependency in the Conda recipe	task	minor	resolved		Antonio Camargo	2021-06-27	2022-05-09
#67: Aniclust Output	task	trivial	resolved			2021-09-24	2021-10-09
#11: Extract viral genome from contig	task	minor	resolved			2020-09-02	2021-06-08
#6: Completeness over 100%	task	minor	resolved			2020-06-04	2020-08-17

#104: Is it possible to trim host flanking contamination rather than remove the contig entirely?

task

minor

resolved

2023-05-31

2024-02-17

#109: RNA viruses

task

critical

resolved

2023-09-09

2024-02-17

#105: Host vs. viral genes?

task

major

resolved

2023-06-27

2024-02-17

#99: DIAMOND task failed. Program should be rerun. - Log file is empty

task

major

resolved

1

2023-01-05

2024-02-04

#110: how to merge multiple samples to get mergeed.fna ?

task

major

resolved

2023-10-25

2023-10-28

#71: How to run Checkv on prospective viral MAGs?

task

trivial

resolved

2022-01-05

2023-05-24

#50: Contig >1.5x longer than expected genome length

task

trivial

resolved

2021-07-06

2023-03-01

#7: Request: please add Git tags for releases

task

major

resolved

2020-06-18

2022-05-11

#69: complete_genomes.tsv empty despite complete genomes

task

trivial

resolved

2021-11-24

2022-05-09

#46: Remove BLAST dependency in the Conda recipe

task

minor

resolved

Antonio Camargo

2021-06-27

2022-05-09

#67: Aniclust Output

task

trivial

resolved

2021-09-24

2021-10-09

#11: Extract viral genome from contig

task

minor

resolved

2020-09-02

2021-06-08

#6: Completeness over 100%

task

minor

resolved

2020-06-04

2020-08-17

Issues

Issues (1–13 of 13)