- changed status to resolved
Cannot find contigs in abundance file from assembly file
Issue #3
resolved
Hey, I generate the depth file using jgi_summarize_bam_contig_depths and it looks good. But when I fed it to metabat, it basically couldnot find any contig from the abundance file . I don't know why, as I can see, for instance, >NODE_13_length_5148_cov_7.170746 is in the abundance file and the fasta file. Is there something about format/code I need to adjust? Thanks
The operation system is Centos 6.3
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