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Issues (1–25 of 38)

Title T P Status Votes Assignee Created Updated Actions
#129: Reduce blocking overhead of --checkpoint option
enhancement minor invalid
#74: relative abundance of bins
enhancement minor resolved
#108: add more progress / parallelism to long running stages
enhancement minor resolved
#134: No target contigs
bug minor resolved 1
#125: Single assembly
enhancement minor resolved
#126: Can metabat be used to bin eukaryotes from metagenomes
proposal minor closed
#110: tagged archive :: program version display GIT-NOTFOUND
enhancement minor resolved
#102: No edges formed by TNF
bug minor resolved
#101: bins to large in the output of metabat2
task minor resolved
#100: Compilation hard codes /usr/bin/git
bug minor invalid
#92: static version of metabat v2.15.
proposal minor wontfix
#91: Supplied depth.txt file vs. supplied bam files
bug minor resolved
#161: reduce peak memory in jgi_summarize_bam_contig depths with very large assemblies
enhancement minor resolved
#149: Depth File contigName Column
bug minor resolved
#139: MetaBAT 2 output varies from one run to another
task minor resolved
#124: Running metabat2 on existing JGI assemblies
task minor resolved
#118: Cannot access http://portal.nersc.gov/
bug minor resolved
#98: question : binning with multiple contigs files
task minor resolved
#95: Script to summarize multiple individual depth files?
proposal minor resolved
#25: Calculating abundance for each bin
proposal minor resolved
#81: Understanding value of additional column vectors for binning
task minor resolved
#78: A question on coverage variance in the coverage.tsv file from jgi_summarize_bam_contig_depths
task minor resolved
#68: Missing Contigs from metabat2 output
proposal minor resolved
#60: Accelerate metabat with GPU
enhancement minor resolved
#59: Add progress indicator for long running operations
enhancement minor resolved
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