Handle deadlock while activating user

Issue #2747 open
Daniel Zoller created an issue
java.lang.RuntimeException: Couldn't execute query 'activateUser'
    at org.bibsonomy.util.ExceptionUtils.logErrorAndThrowRuntimeException(ExceptionUtils.java:59)
    at org.bibsonomy.database.common.impl.DBSessionImpl.logException(DBSessionImpl.java:377)
    at org.bibsonomy.database.common.impl.DBSessionImpl.handleException(DBSessionImpl.java:367)
    at org.bibsonomy.database.common.impl.DBSessionImpl.handleException(DBSessionImpl.java:296)
    at org.bibsonomy.database.common.impl.DBSessionImpl.insert(DBSessionImpl.java:262)
    at org.bibsonomy.database.common.AbstractDatabaseManager.insert(AbstractDatabaseManager.java:133)
    at org.bibsonomy.database.managers.UserDatabaseManager.activateUser(UserDatabaseManager.java:1199)
    at org.bibsonomy.database.DBLogic.updateUser(DBLogic.java:1844)
    at org.bibsonomy.webapp.controller.actions.UserActivationController.workOn(UserActivationController.java:137)
    at org.bibsonomy.webapp.controller.actions.UserActivationController.workOn(UserActivationController.java:66)
    at org.bibsonomy.webapp.util.spring.controller.MinimalisticControllerSpringWrapper.handleRequestInternal(MinimalisticControllerSpringWrapper.java:294)
    at org.springframework.web.servlet.mvc.AbstractController.handleRequest(AbstractController.java:153)
    at org.springframework.web.servlet.mvc.SimpleControllerHandlerAdapter.handle(SimpleControllerHandlerAdapter.java:48)
    at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:933)
    at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:867)
    at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:951)
    at org.springframework.web.servlet.FrameworkServlet.doGet(FrameworkServlet.java:842)
    at javax.servlet.http.HttpServlet.service(HttpServlet.java:624)
    at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:827)
    at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:303)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
    at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:52)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
    at org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:748)
    at org.apache.catalina.core.ApplicationDispatcher.processRequest(ApplicationDispatcher.java:486)
    at org.apache.catalina.core.ApplicationDispatcher.doForward(ApplicationDispatcher.java:411)
    at org.apache.catalina.core.ApplicationDispatcher.forward(ApplicationDispatcher.java:338)
    at org.tuckey.web.filters.urlrewrite.NormalRewrittenUrl.doRewrite(NormalRewrittenUrl.java:213)
    at org.tuckey.web.filters.urlrewrite.RuleChain.handleRewrite(RuleChain.java:171)
    at org.tuckey.web.filters.urlrewrite.RuleChain.doRules(RuleChain.java:145)
    at org.tuckey.web.filters.urlrewrite.UrlRewriter.processRequest(UrlRewriter.java:92)
    at org.tuckey.web.filters.urlrewrite.UrlRewriteFilter.doFilter(UrlRewriteFilter.java:389)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
    at org.bibsonomy.webapp.filters.CacheFilter.doFilter(CacheFilter.java:110)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
    at filters.ActionValidationFilter.doFilter(ActionValidationFilter.java:125)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
    at org.springframework.web.filter.HiddenHttpMethodFilter.doFilterInternal(HiddenHttpMethodFilter.java:77)
    at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:106)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:330)
    at org.bibsonomy.webapp.filters.LimitedUserFilter.doFilter(LimitedUserFilter.java:61)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)
    at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:118)
    at org.springframework.security.web.access.intercept.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:84)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)
    at org.bibsonomy.webapp.util.spring.security.filter.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:84)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)
    at org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:113)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)
    at org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:103)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)
    at org.springframework.security.web.authentication.AnonymousAuthenticationFilter.doFilter(AnonymousAuthenticationFilter.java:113)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)
    at org.springframework.security.web.authentication.rememberme.RememberMeAuthenticationFilter.doFilter(RememberMeAuthenticationFilter.java:139)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)
    at org.springframework.security.web.authentication.rememberme.RememberMeAuthenticationFilter.doFilter(RememberMeAuthenticationFilter.java:139)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)
    at org.springframework.security.web.authentication.rememberme.RememberMeAuthenticationFilter.doFilter(RememberMeAuthenticationFilter.java:139)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)
    at org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:154)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)
    at org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:45)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)
    at org.springframework.security.web.authentication.www.BasicAuthenticationFilter.doFilter(BasicAuthenticationFilter.java:150)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)
    at org.springframework.security.web.authentication.AbstractAuthenticationProcessingFilter.doFilter(AbstractAuthenticationProcessingFilter.java:199)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)
    at org.springframework.security.web.authentication.AbstractAuthenticationProcessingFilter.doFilter(AbstractAuthenticationProcessingFilter.java:199)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)
    at org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:110)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)
    at org.springframework.security.web.context.request.async.WebAsyncManagerIntegrationFilter.doFilterInternal(WebAsyncManagerIntegrationFilter.java:50)
    at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:106)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)
    at org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:87)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)
    at org.bibsonomy.webapp.util.spring.filter.DummyFilter.doFilter(DummyFilter.java:51)
    at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:342)
    at org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:192)
    at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:160)
    at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:343)
    at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:260)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
    at org.bibsonomy.webapp.filters.ContentNegotiationFilter.doFilter(ContentNegotiationFilter.java:179)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
    at org.bibsonomy.webapp.filters.ContextPathFilter.doFilter(ContextPathFilter.java:270)
    at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:343)
    at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:260)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
    at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
    at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:106)
    at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:241)
    at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:208)
    at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:220)
    at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:122)
    at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:505)
    at org.apache.catalina.valves.StuckThreadDetectionValve.invoke(StuckThreadDetectionValve.java:221)
    at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:170)
    at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:103)
    at org.apache.catalina.valves.StuckThreadDetectionValve.invoke(StuckThreadDetectionValve.java:221)
    at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:957)
    at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:116)
    at org.apache.catalina.ha.session.JvmRouteBinderValve.invoke(JvmRouteBinderValve.java:218)
    at org.apache.catalina.ha.tcp.ReplicationValve.invoke(ReplicationValve.java:333)
    at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:423)
    at org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:1079)
    at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:620)
    at org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:316)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
    at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
    at java.lang.Thread.run(Thread.java:745)
Caused by: com.ibatis.common.jdbc.exception.NestedSQLException:   
--- The error occurred in User.xml.  
--- The error occurred while applying a parameter map.  
--- Check the activateUser-InlineParameterMap.  
--- Check the statement (update failed).  
--- Cause: com.mysql.jdbc.exceptions.jdbc4.MySQLTransactionRollbackException: Deadlock found when trying to get lock; try restarting transaction
    at com.ibatis.sqlmap.engine.mapping.statement.MappedStatement.executeUpdate(MappedStatement.java:107)
    at com.ibatis.sqlmap.engine.impl.SqlMapExecutorDelegate.insert(SqlMapExecutorDelegate.java:393)
    at com.ibatis.sqlmap.engine.impl.SqlMapSessionImpl.insert(SqlMapSessionImpl.java:82)
    at org.bibsonomy.database.common.impl.DBSessionImpl.insert(DBSessionImpl.java:260)
    ... 117 more
Caused by: com.mysql.jdbc.exceptions.jdbc4.MySQLTransactionRollbackException: Deadlock found when trying to get lock; try restarting transaction
    at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
    at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
    at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
    at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
    at com.mysql.jdbc.Util.handleNewInstance(Util.java:411)
    at com.mysql.jdbc.Util.getInstance(Util.java:386)
    at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:1064)
    at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3597)
    at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3529)
    at com.mysql.jdbc.MysqlIO.sendCommand(MysqlIO.java:1990)
    at com.mysql.jdbc.MysqlIO.sqlQueryDirect(MysqlIO.java:2151)
    at com.mysql.jdbc.ConnectionImpl.execSQL(ConnectionImpl.java:2625)
    at com.mysql.jdbc.PreparedStatement.executeInternal(PreparedStatement.java:2119)
    at com.mysql.jdbc.PreparedStatement.execute(PreparedStatement.java:1362)
    at org.apache.tomcat.dbcp.dbcp.DelegatingPreparedStatement.execute(DelegatingPreparedStatement.java:172)
    at org.apache.tomcat.dbcp.dbcp.DelegatingPreparedStatement.execute(DelegatingPreparedStatement.java:172)
    at com.ibatis.sqlmap.engine.execution.SqlExecutor.executeUpdate(SqlExecutor.java:80)
    at com.ibatis.sqlmap.engine.mapping.statement.MappedStatement.sqlExecuteUpdate(MappedStatement.java:216)
    at com.ibatis.sqlmap.engine.mapping.statement.MappedStatement.executeUpdate(MappedStatement.java:94)
    ... 120 more

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