Commits

Author Commit Message Labels Comments Date
Flashpoint
Added obiDictyMutants.py
Flashpoint
Added obiDictyMutants.py
Flashpoint
Merged biolab/orange-bioinformatics into default
Flashpoint
Fixed several syntax errors
Flashpoint
Deleted unused imports
Flashpoint
Added obiDictyMutants.py
Aleš Erjavec
Optimized DBDatabase batch_get/pre_cache w.r.t. number of separate network requests.
Marko Toplak
Deleted an obsolete update script.
Marko Toplak
Removed KEGG as the current KEGG script does not uses serverfiles.
Aleš Erjavec
Disabled automatic cache invalidation.
Marko Toplak
STRING database build: do not unzip files.
Marko Toplak
Merge.
Marko Toplak
Update scripts: warn if username and password are not passed.
Marko Toplak
Update script for STRING: reads current version from the webpage and updates only if the database version on SF server differs.
Marko Toplak
Update script for gene sets.
Aleš Erjavec
Fixed KEGG Pathway Browser organism list initialization.
Aleš Erjavec
Using a single global Genome instance in obiKEGG module level functions.
Aleš Erjavec
Optimized Gsea widget organism list initialization.
Aleš Erjavec
Test for the presence of 'self.signalManager'. A default global signalManager is no longer provided by OWBaseWidget.
Marko Toplak
KEGG organism name finding fixes.
Aleš Erjavec
Deleted old and obsolete obiKEGG.py module
Aleš Erjavec
Fixed 'organism_name_search' method.
Aleš Erjavec
Moved old obiKEGG tests inside the obiKEGG package.
Aleš Erjavec
Extended term name mangling to all python reserved keywords.
Aleš Erjavec
Code style and docstring fixes.
Aleš Erjavec
Added 'prefix' parameter for KEGG Pathway database interface.
Aleš Erjavec
Try guessing the gene attribute name.
Aleš Erjavec
KEGG Pathways widget code style fixes
Aleš Erjavec
Fixed 'organism_name_search' for KEGG Genome ids.
Aleš Erjavec
KEGG bug fixes.
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