Commits

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Author Commit Message Labels Comments Date
Marko Toplak
Arrayexpress backward compatibility.
Marko Toplak
Deleted obiData and obiGenomicsUpdate because they were not used anywhere.
Marko Toplak
Moved obiBioMart.
Marko Toplak
Moved obiArrayExpress.
Marko Toplak
Moved obiTaxonomy.
Marko Toplak
Moved obiGO.
Marko Toplak
Moved obiExperiments.
Marko Toplak
Moved obiOMIM.
Marko Toplak
Backward compatibility for gene.homology.
Marko Toplak
Moved obiHomoloGene.
Aleš Erjavec
Removed uses of obiGenomicsUpdate from obiGO. Moved update code to server_update/updateGO.py
Aleš Erjavec
Removed use of obiData module in geo.
Aleš Erjavec
Removed uses of obiGenomicsUpdate and obiData from obiTaxonomy. Moved update code to server_update/updateTaxonomy.py
Marko Toplak
Removed Gary Strangman's stats.py.
Marko Toplak
Moved obiExpression -> utils.expression. Removed dependencies on old Gary Strangman stats.py.
Marko Toplak
Remove dependencies for stats in obiGeneSetSig.
Marko Toplak
obiProb backward compatibility.
Marko Toplak
Moved obiProb -> utils.stats.
Marko Toplak
obiGEO and obiGene for backward compatibility.
Marko Toplak
Renamed obiGene and obiGEO.
Marko Toplak
Version bump.
Marko Toplak
obiGeneSetSig: pca refactor.
Marko Toplak
Updated GSEA examples to the new namespace.
Marko Toplak
Allow organism names (mapped through obiTaxonomy) as species id.
Marko Toplak
Remove obiAssess (superceeded by obiGeneSetSig).
Marko Toplak
Merge.
Marko Toplak
Add all scripts to the updater.
Marko Toplak
OWPIPAx: avoid eval on older Python.
Marko Toplak
PIPAx widget can now handle experiments with only some result types.
Aleš Erjavec
Fixed Gene Info report.
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