orange-bioinformatics / _bioinformatics / obiGeneSets.py

Author Commit Message Labels Comments Date
Flashpoint avatarFlashpoint
Added Cytobands genesets and modified obiOMIM.py. Both need some extra work.
Flashpoint avatarFlashpoint
Added Phenotypes to DictyMutants hierarchy
Flashpoint avatarFlashpoint
First attempt at configuring Orange server update
Flashpoint avatarFlashpoint
DictyMutants geneset working
Flashpoint avatarFlashpoint
Added pickling to obiDictyMutants.py, changed the URL in obiGeneSets.py's omimGeneSets()
Flashpoint avatarFlashpoint
Added obiDictyMutants.py
Marko Toplak avatarMarko Toplak
Fixed update scripts for MeSH, GO, HomoloGene, NCBI_geneinfo, OMIM, PPI. Moved wget to Orange.utils.
Marko Toplak avatarMarko Toplak
Removed the old version of obiKEGG. Renamed obiKEGG2 -> obiKEGG.
Marko Toplak avatarMarko Toplak
Fixes for obiGeneSets. Compatible files were generated and uploaded to SF.
Marko Toplak avatarMarko Toplak
Classes for storing gene set data moved to Orange.bio.geneset. obiGeneSets adapted to make new pickled classes.
Marko Toplak avatarMarko Toplak
Speed up of setsig (obiGeneSetSig).
mitar avatarmitar
Fixing some imports. Marking widgets as prototypes.
mitar avatarmitar
Restructuring because we will not be using namespaces.
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