Source

orange-bioinformatics / _bioinformatics / obiTaxonomy.py

Author Commit Message Labels Comments Date
Flashpoint
Changed the exception value from KEGG.OrganismNotFound to obiTaxonomy.UnknownSpeciesIdentifier
Flashpoint
Added an organisms shortname() function to the obiTaxonomy.py to add short names to geneset tags
Marko Toplak
Fixed update scripts for STRING and Taxonomy.
Marko Toplak
Removed the old version of obiKEGG. Renamed obiKEGG2 -> obiKEGG.
Marko Toplak
Removed use of the old obiKEGG module. Hacked a REST version for gene aliases in obiKEGG2.
Aleš Erjavec
BUGFIX. Removed a failing redundant import.
mitar
Restructuring because we will not be using namespaces.