orange-bioinformatics / server_update /


from common import *
from import obiOMIM

import os, sys

path = os.path.join(environ.buffer_dir, "tmp_OMIM")

except OSError:
filename = os.path.join(path, "morbidmap")

sf_server.upload("OMIM", "morbidmap", filename, title="Online Mendelian Inheritance in Man (OMIM)",
                   tags=["genes", "diseases", "human", "OMIM" "#version:%i" % obiOMIM.OMIM.VERSION])
sf_server.unprotect("OMIM", "morbidmap")

Orange server upload for OMIM morbidmap gene sets
from import omimGeneSets, register

omim_sets_split = omimGeneSets().split_by_hierarchy()
for omim_sets in omim_sets_split:
    register(omim_sets, sf_server)
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