1. biolab
  2. Untitled project
  3. orange-bioinformatics


orange-bioinformatics / docs / rst / index.rst

Orange Bioinformatics documentation

Orange Bioinformatics is an add-on for Orange data mining software package. It extends Orange by providing functionality for some elementary tasks in bioinformatics, like gene set analysis, enrichment, and access to pathway libraries. Included are also widgets for with graphical user interface for, mainly, gene expression analytics.


Scripting Reference


To install Bioinformatics add-on for Orange from PyPi run:

pip install Orange-Bioinformatics

To install it from source code run:

python setup.py install

To build Python egg run:

python setup.py bdist_egg

To install add-on in development mode run:

python setup.py develop

Source Code and Issue Tracker

Source code is available on Bitbucket. For issues and wiki we use Trac.