Differentiation add-on for Orange
Differentiation is an add-on for Orange data mining software package that allows the analysis of stem cell differentiation data. It extends Orange by providing functionality to download temporal gene expression data from GEO, identify the most informative genes and construct a predictive model of the cells differentiation stage.
For further details refer to: L. Zagar, F. Mulas, S. Garagna, M. Zuccotti, R. Bellazzi, and B. Zupan. Stage prediction of embryonic stem cell differentiation from genome-wide expression data. Bioinformatics (2011) 27(18): 2546-2553