1. boliu
  2. galaxy-globus-cloudman

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boliu  committed 26a5400 Draft

modify test-data

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File test-data/1.axt

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+##matrix=axtChain 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
+##matrix=axtChain 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
+0 chrX 3022176 3023241 chrX 132722808 132723933 - 67671
+tcttcatgtgacttgcttgtgccttttaggacctgctcaagcctgatcacatatgtacaacttccagttgataatggattgttgctgtgcacaagctactttttagcttcattggttagataatactcagctcatgagatgcaggtcagattacatggcaatttggtagctcattgtcaaatgtttagtttctactgagacctaatatcaggccaagaactgtcactcaaatagagaatcgctatctgcaaaaatcatttgtccaaagtacctagggtttc----atctgtaatacatgtgtaggggcctgctaaatgctccaagcagcatccccatctgccactgtcacctc---atgtgcc--------------------------tagtcatagaaaaacatgcacagcagcctggacctgttaaagaaacttctcctatttctgtacccacacaaagctagcttctcttcaagtcacttggtatatggTATGCTTACCTTAATCTGTTGTGTGAGCCATTTATTAttattttcccattttctgactgtataatttggatattatacttataagttggcagaTATATG---------CATCAGAACATGGAATATGTTGGAAGAATCAAAAGGAGAGTTAGAAGGGGGCAATAGGAAGATGAACATAAACAGGGTACGTACAGA---------------AAATTTTTCAAAGAATAAATAAAACCATTAAAAAAACAAACAAATATACAATGACCATAAAATATTGCTATACTAAATTATAAAA------CAGAAATATTTATATGTACAAAGAAACAAATTCCAAGCCAGAAATTCAACAGGGAATATACAGCATAATAAGATATATATCAATTAGAAAAA-TATCAAATTAAAATTATAAGCTAGAAAGTATTAAAGGGAAAAAATGGATGAATTTAATAGCTTA-------TGCTTAAGAATAATTGGCAAATCAGAAGCCTTGTAAGAAACAATAGAAATAAAGTTT-AAGAGGAATAGAAGAGAAAAATAATAATGCTGAAGGCAGAGGTCAGCATAACAGGAGTGTGAATTGGAATCTCAGACTCACAGGGAAGGTAGAAAGAAGCAGAAGATATTTAAACAAataaa
+tcttcatgtgacttgcttgtgccttttaggacctgctcaggcctgatgacacacatataacttccagttgataatgcattactgctgtgcacaagctatcttttggcttcattggctagataatactcagctcattaggtgcagttcagatcacatggtaatttggtggctaattgtcaaatgtttattttctactgagccccaatatcagtccaagaactgtcactcaaatagaggattgttgtctgcaaaa-tcatttgtccaaagtccttcgtgtttctttcctctgtaatttatacataggggccttctaaatgctc-aagcagcatccctatctgccactgtcaccaccacaagtgccctccagtctgctggatcataaaatcctagtcatagaacaacatgcacagcagcctggacctgttgaagaactttctccaattcctgtactcacacgaagctagccactccctaagtcacttggtatatgCTATGCATATCTTAATCTGTGGTGTGAACTACCTATTATT----TCCCCGTTTCAGACTGTATAATTGTGATAATATATTTAGAAGTTAGtatatatataatatatatatatCAGAATATGGGATATGCTGAAAGAATCACAAGGAGAGTTAGAAGGAGGCAATAGGAAGATGAACATAAACAGtatatatatatatatacatgtatatataATTTTTTCAAAGAATAAATAAAAATATTGTAAAAG-AAACAAACACACAATG-TCATAAAATATTGCTCTACTATATTATGAAATAGCAACAGCAATATTTGTATGTACAAAGAAATAAATTCCAAGCCAGAAACTCAGCAGAGAATTTACAACATAA---GGCATTTATCAATTGGAAAAAATACTAAATTAAAATTATAAGATAGGAAGTATTCAAAAGAAGCA-TGGATAAATTTAATAGCTCACTAAGAATGCTTAAGAATAATTGGCAAATAAGAGGACCTGCAAGAAATAATAGAAATAAAGTTTTAAGAGGAATAGAAGATAAAAATAAAAATGCCTTAGGCAGAGGTTAGCATAACATGAGTGTGAATTGGAATCTCAGAGTCACAGGAAAAGTAGAAAGAAGCAGAAGATATTTAAAGGAATGAA
+
+1 chrX 3025132 3025662 chrX 132731310 132731841 - 23012
+ggagaaagggaatgggggatga-gagtgggactgggaggagaggagggaggagaggctgtaatcaggatgtaaagtgaataagcaaataaGTTAAGGAAAACAACAACAAAAAGAAACTGGATTAATTTCAATTTATTCAAGAACATTGGTTATTTCCATTAAGTACTGTAGTATTATGTATATGAATATAAAAATCCTTTCATCAAAGCAAGGAAGAGAGCACAAAGCTGCCCTTAAGTCATTGAAGACCTGGAGCACCTATGGGCCTCCCAAGAGGTTCTCACAAAACCTACAACCTCCATCCCAAGAGCCTGTGTCTGACAGAGCTGGTATGAGAAAAGGAGACAATTCTTCCC-----CAGG------------TTTTAGCCAGACTTTGAGTACACAATGGGATAGTGAGGAGCC----------------------CAGTGAAAGCAA------------TTAGTGATTTGGCCTGTGACCCTCTAGCACAATGTTTTGCAGGTCCAGTTGGACATGACATGTTTTCATTGGAAAGGCACATTTATAGTACCTAATGACAGCCCATGTCAA-GTGGCA
+ggaggaggaggaggaggaataacaagaagaagaagaagaagaagaagaagaagaag--------aagaagaagaagaagaagaagaagaag--aagaagaagaagaagaagaagaaACAGGATTGATTCAAATTTATTCAGGAATACTAGTTATTTCGAATAAGCCCTATAGAATTATGTACATGAATCAAAAAATCCTTTCATCAAAGCTAGAAAGAGAGCACAAAACTGACCATAAGTCATTGAATACCTGGAG-----------------------------------------CTCCATCCCAAGAGCCTATGTCTGGCAGAGCTGGTGTGAGAAAAAGAGGCAATCCTTCCCTGCTGCAGGAATAATCAAGCATGTTGGCTGGACCTTGAGTACACATCAGGATAGTGAGGGGCCTGGCAAAAAGCACAGACTATGGCACTGAAAGAAATTAATAAGGGACTTAGTGATTTGGCTTATGACCCTCCAGCACAATGTTTTGCAGGTCCAGTTGGAGATGACATG-TTTCATTGGCAAGCCACGATTATGGGACTTAATGACAGCCCCTGTCAAGGTGGTG
+
+2 chrX 3030008 3030565 chrX 132731842 132732393 - 30932
+CATTGTTTTTGACAAATCAGTTTCCTTTAGACTACACCTTCAAGCCACTTAAGGTTGCATTTACAACAAAAATTTATAATCTAAATATCAACAGTAATGGCAATATTTATCTTGATAATCTCAGATCACAGTGTCTCCTGCTTTAACTA-TTTCTAATGTTCATTTATCCATTTGTTCACTGCTATGTGATCCAAACCCTGATGATCTCCTAGTGCCAGAGACTGCACAGATCT--AAAACAGATAGTGATAAATACAACAGAATATCTTGGGAATGGACTCAGAAGTATGCCATGTGATGTTACCTTAAAGTCAGAATAACTTGCATTTTATAGCTGGAATAAACTTCAAATTCCTATTCCTTTTTTTGATCTCATGTTTTTCATTTT--TTTCTTTTTATTTCCCTCCTTTCATTCACATGTTTATCTAAG-AGACTTAAATTCTTTCAGCTTTAGACAATAACTACTTTTAGAATCTGCAAAGTAGTTACAAGAAAACAGTTGCCCAAGATTCAGAATCTTTTTAAAAAACTGGAGCTTGTCCAGATACA-TATGTAGCCAA
+CATTCTTTTTGACAATTCATTTTCTTACACACTACCCCTTCAAACCACCTATGAAA------ACAATAAAAATTTATCATCTAAATATCAACAGTAATGGCAGCATTTGTCTTGATATTCTCAGATCACAGTGTCTCTGGCTTTAACTAGTTTCTAAATTTCTTCTATCCATTTGTTCACTGCTATCTGATCCAAACCCAGATGACATCCTAGTGCGAGAGCCTGCATGGATCTCTGAAACAGACAGAGGTAAGTACAACAGAATATCTCAGGAATAGACTCAGAAGTATGCCATGTGACGCTGCCTTAAAGTCAGAATAATTTGCA--TTACAGCTGGAATGAACTTTAAACTGCTGCACC-TTTTTTGACCTCatttttttaattttaaattttGTTTATCTCCCCCCATTCATTCATGTGCTTACCTGAGAAGACTTAAGTTATTTAAGCCTTGGATAATAACTGATTTTACAAACTATAAAGTAGTTACAAGAGAACAATTGTCCAAGATTGAGA----TTTAAAAAAGAAAAAACTGGAGGAGGTAGATTATGTGGCCAA
+
+3 chrX 3030576 3032510 chrX 132743487 132745311 - 109736
+ttgtttgagacagtgtttctctgtgtagccacatctgttgtggaactcaatttgcaaatcaggctggcctcaaactcacagagatctacctgcctctgcctcttgagtgctagtattaaaggcatatgcaaccactgcctggctaaaataatatttttaaaataaCATGGTTACATGCCAAATTGACAAGGGGTGGATA------AGCCTATACtgatagataatttcacagaatctagaaacaccctggggaaaaatgtttgcacatgcctggg----gccagggagat--gttaatttctttggttatcgaaggagggagacctaatctaattgcctaa-tgaatgaaaagaagtaagtgaagtacctgagctcatctcctgttggttcctaaatgcaaaagcaatgagaccagctagcctcctgtttcttccatttctttcgccaatatcttctctgctatgatggattgtctttcttaaattgattgccaaaatcatctcttattttcttaaattgtttcttgttggttattttgacacatctatgagaaaaggaactaatataGAATGGACATGGTGGTGACTTGGAAAAGTTATGGAGTTACATATGA-TGACCGTGGTCTGACCAGGAAGAGACAGGGACAGATAGTCCAGGTGTCTAAGCACAAAAAAGTAAATAGATATGTCTCAGATAACTGAGAGCCCTATGTGGTTAACAAGCAATTGGGGCATACCAGGGCTTACAAATAAATGCTCTATATGATCCATGTTTCACCTTCTACTTTCCTTCATTGTTACATCCTACCCCATCACATAAAGAAAATATcacacacacacacacacacacatacacacagacagacagatagactgacacacacaaacacacacacacacacagagagagagagagagagagagagagagagagagagagagagagagagagagagTCAAACAGCATTTAATTCCTGTGTAGCAACAAGGACATCTTGCATGCAGTTCAGTCTGGTTAAGGAATGGGAGAAGCAAAATGAGGCTTTAGTCAATGATAGAGGAAGGAAGGGATTTAGATGGGTCTTGAGGCTTTGAAGATGAAGTATTAACCAGGTTGCTTGAAAGATCGCTGTGTCTTCCCTTTTGATGACCCCAAGCACAGAGTACATCACCGTTGTCTTCATATTCTTTTTCACTTTCTGAGGAGCTTTCACCAAAAGCACGTTGCTTTTCATAAACAAAACAACATTTGGATGAGCGACGGCCCAAGTGTTCATTGTCAATAGTGTCACTAGAACACCCAACCTTATTGCCTGACTTCCCCTTCTCTAACTTGTTGGACATATTGCTACTTTTTGGCTTATCACCCAGAACAACTGTGGGATCTGAGATGGATCTTCAGTCAGCTTAG------------------CAGAACTGGAAGCCTGGCAGAGGAGAGAAATCAATGTATCCAAAGAGTCTGAGGAAATAGGAATTTGAAATCAAGTCAGAGTCACAATTAAAATTTAATGTTGCAATTATTTTTATCTTAGAATTC----------GTACACAACTTACTCTTGTTTCTCAGTTGTTGTATGTTCAAATTCATATTTTGAGATCACAGAAAATAATTTGGTTATAAGGGAAATGGTAGAAAGAAAATTTGGGTCTGACTATTTCATTTTCCTCCTGTCAAATGAAAAGGCAAATGCTACCTCTAAATACATATCTTTGTGAAAATAAGATTAGAGAAAGCACCACATGGATTTTAACTTCTGATTTTACTTGAGTAATAACAACAGATACACATGA-TCATTATTTATTTCTGCC-ATATAAGTGATTCTCTGAGTAAGTCTATGGCCTCCTATGTGAACTGATGAGGGTTTGAAGATATGGCTAGAAAAGAACTCAAGTGCCAGGATATAATGGGAATCCAAATTTCATACTAGAATCCTTCAAGAATTATTAATTTA
+ttgtttgagacaggatttctctgtgtagtcgcatctgttctggaactcattctgtagaccaggttggcctcgaactcacagagatctggctgcctctgcctcccaagtgctaagattaaaggcttgtgccatcattgcctggctAAAATAATATTTTTAAAACAACATGTTTACATGTCAAGTTGACAAGAGGTGGACTtgtgatagcctatacttatagctaattttacagcatctagaaacaccctgaggacaaatgtttgggtgtgcaggggcagggcgagggagtgcagttaatagctttggttagcaaaggtgggagacctagtttaactgcctgactgaatgaaaataagcaagtgcggtatcagagctcatctcctgttgcttcctaaatgcagaagcattgggaccagctagcctcctatttcttccatttctgttgccc-catcttccctgctatgatggaataacttccttaaactgattgccaaaatcatctcttatttccttaaattgtttcttgtcagttattttgacacatctatgagaaaaggaactaatataGA-----CATGGTGGTGACTTGGAGAAATTATGGAGTTTGATGTGAGTGAACATGTGTTGACCAGATGGAGATAGATACACATAGTCCAGGTATCTAAAAATTTAAAAA-AAATGTGTATG-----GAGAACTGAGATCCCTATGTGATTAACAAGCAACTGTGGCATACCAGAACTTACAAATATATACTTTATATGATCCATGTTTCACCCTCTGCCTTCCTTCATTGTTACATTCCTCCCCATCACACAAAGAAGACACATCTcacacacacacacacacacacacaca----------------------cacacacacacacacacacaca-------------------------------------------------AGAATCAAACAGCATTTAATTCCTGTGTAGCAACATGGACATATTGCATACAGTTCAGTCTGGTTTAGGGATGGGAGAAACAAAGTGAGACTTTAGTCAGTGATGGAGAAAGGAAGGGATTCAGATGGATCTTGAGTCTTTGAAGATGAAGTACTAGCAAAGTTGCTTGAAAGATCATTTCTTTTTCCATTTTGATGAC-------ACAGAGTTCATCCCAATTGTCTTCATCTTCTTTTTCGCTTTCTAAGGAGCTCTCACCAAAGGCACATGGCTTCTCAGAAACACAACAACATTTGGATGAGAGACGGCCCAAGTCTTTGTTGTCAGTAGCGTCATTTGACCACCCAACCTG---GCCTGACTTTGCCTTCTATAATGGGTTGGACATATTGCAATTTTTAAGCTCAGGCTCCAGCACAACTGTGGGCTCTGAGAT--ATCTTCAGTCATCTTAGATGTTGAATCTTCCATAGCAGACCTGGAAGCTTGGCAGAGGAGAGAAATTCACGTATCCAAAGAGTCCAAGGAAATAGGAAATTGAACCCAAGTCAGGGTCACAATTAGAATTTAATGGTGCAATTGTTTTTGTCCTGGAGTTCTTACCCTGAGGTATCCAACACACTCTTGTTTCTCAGTCTTTGTTTGTTCAAAGCCCAATCTTGAGATCAAAGAAAATA-TTTGATTATGAGGAAAATGGCAGAAAGAAAATCTGGGCCTATCTACTTCAATCCCCTCCTGTCAGATGAAAAGGCAAAT-------------ACATGACTTTGTGAAAATTATCTTAGAGAAAGCACCACATGAATCTTAACTTCTGATTTTATTTGAGTAATAACAACCAACACACACAAATCAATATTCATTTCTATCTATATAAGTGAAACTCAGAGTAAGTCTATGGACTAATGTGTTAACTGAT---------------------------------------------CAAAAGGAATCCGAATTTCATACTAGAATCCTTCAAGAATTATTAATTTA
+
+4 chrX 3032511 3033698 chrX 132745428 132746659 - 78115
+TTGTACAAAGAATGTAATTTACTGTGTATCTAAATTTTAATGACATACCAATATGACGGCAGGAAATGGATAGTTTAGAGACTTTGGAGGTTAGTTATTAATATAGATGAGTAAATAAGCATGAACCAATGTCAGTAGTGGTGATAAACAGAACGAAGACAATTGTAGATAATTTGGTCACTGAAA-GGGAAAATTACTTGTTATTAAGGGTGGACATAAATTAGAATGGGGGCAACATCAGACCTGATACAGAGGAGGACAAGACCAGGCCAGAAAAGTTAGCAAACTAATAACCATTGAAAATCAGAATCCTTGGGTTTTAAGTGGCCCACTTTATAACATACCCATTTAATTA---GAATCTCCAACAGGTCTTTCTGGTCTTATCTAGATATTTTGTCAGCAGAC-ATCCTTAGGAGACCAGTTTTGCTGTGGCTTTGTTGTGCTTGCTTCCATGACAACTAAAGACACAAATAGAATGTATTGTTTCTATCCCCCAAGAGACCTGCCTTTGAGTAGTCAACCTACTGATTGACTAGCAAAATAGTTTACCTTATACATTCTTGTGTCATGAGGGACTAGACCTTTACAAAATAAATAAATTGAATTTAAAAACCC---------------------------------------CACAACCTTAAGTCATTTTAATTCCTGTCAGTGCTTGGCAAGGCCTGAGAATTTCATCTACATTATGGAT-CTGTTAAAGCTCTGGTCCTCAAATTTAGGTGTCAGAACTTCTTGAGAAAATTTTCATCAGTGTATACTTATTGAATAAAGCAATGGGTTTCATAAGGCTGCCTTGTTTAAA------TATATCACTTACTTTGACTATATTCACTTTCCATTACTCTCTTCTATCTC----CCACAAGTGTCCTTTTCCATGTTTAATACA--TTTTTTAAAATAACATGTCCTCAGTTCCAACCCAGAAAGTCTAAAATCCAAACCTGCTATAAATCTTTTAATGTTTTACATTCTAAAAGTATGACTGAAAAGTGGTTTGGAAACATTTTTTGGGTCAACATGTTGTTGGCCAAACAAAATATATCAGCAGCCAAAGTCTAGCTCATGATCCCAAAGCATACAATACCAGTAGACTTTAAGTTTTTATTTAATTCTTTTAAAATGTATGTGGGTGACATCTTTGGTAAAATTTTAAATGATATCTGTATAGGTAACTTTAGAATAACACaaataaaaatattt
+TTATACAAAGAATGCAATTTGCTGTGTATCTTAATTTTAATGAAGTAGCAATGTGAAGACAGTAAATGGATTGTT-AGAGATTTTGGAGTTTAGT----AATGTAGATGAGTAATTAAACATTAACTAGCATCAGTAGTAGTGACAAGCAGAAGGAAGACAACGGTCAGTAACTTGGTCATTGAAACGGTAAAATTACTTGTTATTAAAGGTGGGCATGAATTAGAATGGGGGCAACACCAGATCTGATA---AGGAGGACAAGACAAGGCCAGAAAAATTAGCAAACTAAAAACCATTGAAAATCAGAATCCCAGGGTTTTAAATGGCCCACTTTATAACATACCCATTTAATTATTAGAATCTCCAACAGGTCGTTCTGATCTTATCTAGGTACTCTGTCAGCAGACTACCCTAAGGAGATCAGTTTTGCTGCTGCTTAGTCGTGCCTGTTTCCATGACAACTAAAGACACAAATAGAACGTAC-ATTTCTATCTCCCAAAAGACCTGACTTTGAGTCATCAACCTACTGATTGACTTGCAAAGTAGTTTACTTTATACAAGCTTGTTTCATGAGGGACAAGATCATTATGAAATAAATAAATTTAATT-AAacacacacacacacacacacacacacacacacacacacacacacacacaGCCTTAAGTCATTTCAATTCCTGCCAGTGCTTGGCAAAGCCTGAGAATTCCATTTACATTATGGATTCTGTTAAAGCTCTAGTCCTCAAATTTATGTGTCAGAACTT---AAGAAATTTTTTATCAGTGTATACTTATTGAACAAAGTAATGGGTTTCATGATGCTGTTTTGTTAAAAAAATCATATACCATATATTTTGTCTATATTCACTTTCCATTACTTTCCTCTATCTCTCTCCCACAAATGCCCTTTTCCATGTTTAGTAAACTTTTTTTAAGATTACATGTCCTCAGTTTCAACCCAGAGAGTCTAATCTCCAAACACACCATAAATCTTTTAAATTTTCACATTCTGAATGTATGACAGAAAAGTGTTTTGGAAACATTGTATGGGTCAACATTTTGTTGGCCAAACAAAATATATCAGCAGCCAAAGTCTAGCCCATGATACAAAAGTGTGCAATCCCCGTAGATTTTAGGTTTTTATTTAATTCTTTGAAAATGCATGTGGGCGTCATCTTTGTTAAAATTTTAAACTATGTCTATTTAGGTGACTATAGAATGACACaattaaaaatattt
+
+5 chrX 3033699 3034238 chrX 132747054 132747589 - 33753
+aaaaataaCAGGTCCCCAATGACAACATTTTACGTTGTCACGAGTTTATTAAATCTCAATTATGGACATTGGCAAAGAATTATTAATTAAACAAGAAGCCTGCTTGAGAGCAAAGCACCTTTTTACTTGTATTCATCA--GGGTTTTT---TTTTTCTTTTTGTTATATAGTTCAGT---------TCATGTTTTGGTTCGTGCAGACATCATTGCAGTTAGCACCTAGAAATATTCCAACCTCTCAAACTATCTCTTCCTACCCACATTATTAAAAATCttcttgatccctggcaataatgatttgtgctccatctgtataaattcattatctatataatgtattgtaaaggaattatagacattttgaaattggatttttttcactctctgtaatgcccctgaaacttattcaattattgtttcttctttattattgctgactagtgttgcatttatgaattaacaaagttgttgaagatatttaggttgttttcatttttgaaactatcatgaataaagttatagtcaatactcatacaagacttgtcaga
+AAAAATGGCAGTTCTTCAATGAGAACAGTTTATATCATCACAAGTTTATTGAAGCTCAATTATGGACATTAGCataatattattaattaaattaCAAGCCTGCTTAAGAGCAAAGCACCTTTTTACTTGTACTTATCACTGGGCTTTTTCGTTGTTGTTGTTGTTATATAGCTCTGTTCAATTGTATCATGTTTTGGTTCAGGCAGACATCATTGCAGTCAACACATAGATAG-----------TCAAACTATCTCTTACTACCCACATTATTAAAAATCttcttgatccctggcaataacaatttgtactcc-tctgtata----cgttatctagacaatgctatgtaaagaaattacagacattttgaaattggatttttttcactcagtgtaatactcctggaatttattcaactgttgtttcttctttgttattgctgactaatgttgcatttatgaattatcagagttgtt-aagatatttaggttgtattca-ttttgaagctatcatgaataaagttgtagtgaacacttatacaacatttgtcaga
+
+6 chrX 3035181 3035230 chrX 132747590 132747639 - 3318
+gtgcataagttttcctacttctagaataaatgcctaaAGGATATGGCAAC
+gagcatacattttcctacttctagagtgaatgcGTGAAGGATGTGACAAC
+
+7 chrX 3035231 3035841 chr9 84391632 84392261 - 18947
+ACTTGtttgttttgtttattagatattttctttagttacatttcaaatgttattccctttccaagtttcctctccaaaaacactctattccttctccctttcccctgctcaagaa------------cccacccactcccacttc-ctagaactgtctgtcccctgtaccggggcttagaacaac-acaggaccaagggcctcttttcccatcgatgaccaactaggtcatcctctgctgcatatgcatgagtaggccc---------tctctgtattttctttgattggttgtttagtcccagggagcttaggggtgg-tggttcattcatattgttgttcctcctaggggaatgcaaatcctttcagcttcttgggaaatttctttagctccttcaatggggatcctgtgctccttctaatggatgactgtgagcatccacttctgtattagtcaggcactggcagagcctctcaggagacagctatatcaggctcctgtcagcaagctcttgttggcatccacaatagtgtctagttttggtgtttgttttggggatggatccccaggtagggcagtctctggatgatcattccttcagtccctgcttcacactttgtctctgtaactgctt
+ATTATTTttctttctttattcattattttatttatttacattttaaatgttgcccctcttcctggtcccccctcaaagagttctttaccccttct-ccttccccttgcttctgagagagtgatccccaccacccactcctacttcacccccactagcattccccttccctgggacatcaagtttctactggattaagtgcatcctttcctactgagattagaaaaagcagccctctgctacatatgtactgg--ggcccacagactagcccatgtttgctctttggttggtgggttagcctctgggagctccgggaggtccagttagttgctactgttgttcttcctatggggttgcaatccccgtcagctccttcagtccatcccctaactcttccataggagtctctgacctcagtccgaaggctggctgtaaataactgcatctgtctcagtcatctgctggtagagcctctcagaggacagcaatgctaggcttctgtctgcaagcacaacatggcattaataatagtgtc-aggtttggtacctctgcatgggatgaatctcaagttgcgctggtctctgtatggcctttctttcagtctctgccttatg-tttgtccctgcatttcctt
+
+8 chrX 3036436 3036947 chrX 132751812 132752320 - 32759
+tagaaatacctaaacgtctataggaattcactgACAGAAAGGAAAGGTGATGCTCAAAGTCTCAGGGCAGTGCTACAATGCATAGGCAAGCAATACCATTTAAATGGAGAGATTTAAAAAAAATCATTTCTTCACCCATAAACCAGAACCAATTATTCAATATGGTCAAGTACCATGTTTTATTAGAGTTATTTCTGAATTAGATCATTGAACAGGATTCTAACCTAAATAACAAATTT-TATCTAAAACATTTTCTAGACTAAAAAGCATGCTTTGAGCCCTCCTTAAATAAAAAGGCCCATAGTGTATGAAACTAATCAACCATAGATCCTATATTTACTCCACCAATCCTCAGGACAGTTTATACTCTTtgtcctagttgggattttatttatgtgaacagacatcatgaccatggcaagtattataaaggacaacatttaattggggccggcttacaggttcagaggttcaggccattatcatTG----TATTAGTCAGTGTTCTCTGGAGCC
+TAAAAATGCCTAAATTTCTATAGGGATTCACTAACAGCAAGGAAAGGGGATGCTCAAAGGCTCAAAGCAGTGCTATGATGCATAGGCAAGCAATATCATTTAAATAGA-----TTTTAAAAAATCATTTCTTCAACCATAAACCAGAACCAATTATATAATATAGCCAAGAAAGATGGTTTA---GAATTATTTCTGAATTAGATCATTGAATTGGATTCTAACCTAGATAACAAAAAAATAGCTAAAACTCTTTCTAAACAAAAAAGCAAGCTGTGAGCCCTCCTTAATTAAAAAGGGTCATAGTGTATGAAACTGATCAACCAGAGACCCTGTATTAACTCCACCAATCCTCAGAACAGTTTATGGTCCTTCtcttagttatagttttattgctatgaatagacatcatgaccatggcaagtcttataaagcacaacatttaattggtgaaggcttatgggttcagaggtccagtccattatcatTGTATTtattagtcagggttctctaaagtc
+
+9 chrX 3040802 3041403 chr5 51053187 51053738 - 12815
+ttttggttaaatggtctggg-ctgtgtattccttgcatctttttgggtgtatttacacttcttttcatgcagaatttttctttctagtttcttgtgtagtactgaattgctggatagatattacttaaatataataatatttgttttttaaatcaggaaatggtcttatttctccactgattataattgatagttt-gctaggtgttgtggtcctggctggcatt---ttttggtctttcataatg----tgtagaccatttgcccaggccctttgagctttcaaagtctccattaaaatcaggtt------ttattataatgggcctgactttatatataacttggtctttttcccttgcagatttcatatcatttctttgttctgtacatttaagtgttttcattattatgtgtcataggaaagggtgtgtgtgaacttttctagtcctgtctggggtgtgttctatatgcctcttgctccttgatatttcactcttgcactatctatgtctaggatattttgtt--------------aaaatattttctgtgcctttgacctgagctttgtctcctttttgtaaacttatcagtcataaattttggtctgtacatagtgtcccagat
+ttttagtaaactgttcagggattacttgtttcttgtgtcctcttgggtagagctaa--------ccagaatgaagttgtccttctagtgtcttctgtagagctgattc--------------atttaaat-tccttacatttgttttt---attatgaaatgttttcctttctccctcagttaagattgctggttttgctggccatggtagtccgggctggcattatgtcattgttgttcataacaaacttgtaaaatgtctgcc-aggccctctg-gcttttaaaatctcgattgcaagtccattggaaagctctgctaatgaccctgtctttatatgtgacttcatttttaccc-----------------atatccttgttctgtacatgtacgtgcc---------------------aaggagagttt-----cttttctggtcctgtctgtctggtgtcctgtatacctcatgtacttcgata----ggaattgctttctttagatttgggatattttattctatgattttgttaaaggtattttctatggcttttacctgagtttcttctccttcctttatatcaattattcacaggttt-ggtct---cttcttgtcccagat
+
+10 chrX 3042537 3043219 chr5 51053739 51054217 - 9161
+TCCAGATAGTCTGATGTTTTGTGTCTAGATTTTTTCCATTTACTTATTTATtttatttacttattcactttatatcccaatcacagctgcccctactcacagtctcttcctcacaatctttccctcaccccctccccttgtcctctaagaagggggaccccctgggttccaacccacactgTTGTTCCTAGATCtttaagatctaatatttccaatgtcagagatatccattccttccacgttgttccccagaccttaaatt----ctttcacttcattaaatcagttgattaggcttttctctgaggtctttgtttgacttcctgagtttttatt-ttcaagtcttatttcagtttgggtta-atttagtcattctacttctttgtcatattgtattttcatag-ttgaattgtttacatttcctcagtcaactatttttgtcttcagagttctcagtgaaacatttatt-catatcct-tttaaggtccttgaacatatgcataattgctattttgaagtccttaccacatacttcaatctaaattattctttcttagggaatattatagtaaggggttgtttctggtggaggcatattgtcatcactgtttatgtttgttgttttttgtttttttttttgtttttttgttttttgcttttttgCATTGGGATCTAAATATCTAGATTCA
+tcc------ttgaatggtttttgcctagagttt--------------------------------aaatttatatt--------------------taacaagctctt--------------------------------------------------------------------------------tggatgattga---------------------------tccatttcttctactttgtcttcaggacctgatattttctcttccacttcattcaat-agttgacgaggctttcttctgagcctgttgtgtgacttcctgctttttttcaattcaggttttacttcaggttgacttgtctttagccagtctatccctttgttaacttctattttcttatcttgaattgtattcattatttcattcatttgtttatgttttcttgatcttcattcaggcatttttttcacagcttctttaaggtc-------atattcataattgctattttgaagtccttgtcttgtgcttcag-ctaagctgatctctc--agggactatgataataggtgctggtttccagaggagacgtagtgtctttgttgtttatgtttgtg-------------------------------------tttttGACATAGGATCCCAGTGTGGATATTGA
+
+11 chrX 3043248 3043585 chrX 132759268 132759608 - 22408
+TGTATCTATTTTTGCCTTTTGGGTAGGCATTTAGTTCTTTGGTTGCTATTACTCCTATCTGACAAGTTGTCAACCATCAGAATGATACTTGGTTCTCATTCTTTGAATCACTCGGGATTTTAATATTCGGATTCCAACTTGTACTGGATAGGATTTTCTGGTTGCAACTCTGTGTTCAAACCATAAGCTGTCCCAGATCAATTCAGTGGGTTGTATAGGTAATAGGCTAGCAGTTGAGGAGTGGAGACTGACTCTGGACGTCTTCTAGGTAGGGTTTAGGATCTGGCTCTTAGGGTCAGG---CAAGGCAGAATTATTGTACATTAGTGGCAGTTAGTGAT
+TATAACTATTTTTGCCTTTTGGGTAGGCATTTGGTTCTTGGGTTGCTATTACTCTTACCTGACAAGTTGTGAACCATCAGAATGATACTTGGTTCTCAGTCTTTGAGTCACCCTGGATCTTAATATTCCAATTCTAACTTGTATTGGATCTAATTTTCTGATTGCAACTCTGGGTCCACACCATAAACTGTCCCAGATCAATGTAGTGGGTGGTTTAGGTGATAGGCTAGCAATTGGAGAATAGCAACTGACTCTGGAGGTCTATTAGCTAGGATATGATATCTGACTCCTGGGAAGAGGGGCAGAAGCAGAATTAGTGTACATTAGTGGTAGTTAGTGAT
+
+12 chrX 3044072 3044955 chrX 132759936 132760824 - 57490
+GTGATGAATCCCAAGGGAATGGATATGGGCTTCAAGGAGGGGTTGAGGTGGGCAGGCACGGAGTAGG----TTTAAGGGGAATTTAAAGAGACTAGAATCAAGAAGATGAAGTAAGGCACAACCAGCCTGTCAACATTCATTGTCCTATGCATATCTGTCTGTAAGACCTAGGATTTGAAGACTTTAAAGAATGAAGCAGAACACAATCTAATACTGTAGACAACTTTATTTCAGTTTCAGTGTTTTTATTCAAAAATTTAATAAAGTAAGCAATGATTCAAGGAAGGTTGTTTGAGTTCAGAAAAAC----ATAAAAGCCAGCAAGCACATGCTAAATATTAACCGAGCAGCTCTTTCAGAGAACTTTCTTAAGACAGACCAATTTAAACACAAATGCCTAGCACCTATTATA---GACTATATCTGAGAAAGCTTGAAAGCAAGGCAGAAGGCCATAACCAGATTCAGGGTACACTGAAAAAAACACTCAGCCTATCCTTCCACCAGACTGGGCTCTGTAGTTGTCTTCCAGCATTTAACATGAATGAATAAACATGCCTTATGAATTGAATGTAAATACTTGACACAGGAGTCATGAAATCACATCCAAGAAAAATACAGGGAACAAAATCCACCTAA-GGAGTGGGAGGAACAGCTTCTTCTTTTTCCTCTGGAACCTCTCTAGCTTCTCTCACAGTTCCCCAAGGCATTCCCT--ATCATGTACCTCAACAGTAGCAGCCTACGTATGTCTCAGCCATATTGGCCATGGATCAATAGAAGAGAATGGAGAGCACAAAGTAATGGAGATGGGCTGGGAGGAATGGCTTAGGTGAGTGCTAGAGCAAAATCTAGGAAGACTCTGGACCTAAGCCACATGTGACATTCCACCCCCA
+GTGATGAATCCCAAGGGAATGGATATGGACTTCAAGGAGGGGTTGAGGTGGGCAGACACGGGGGGGGGGGATCTAAGGGGAATTTAGAGAGACGAGAATCAAAAAGAGAAAATAAGGCACAGGCAGCCTGTCAACTTTTGTTTTCCTATGCAGATCTGTCTATAAGACCTGGGATTTGAAGACATTAAAGGATAAGGCAGAATACAGTCTAATGCTGTAGACAACTTTATTTCAGTTTCAGTGCTTTTATACACAACTGTAA-AACGAAAGCAATGATCCAAGCAAGATTGTTTGAATTCAGAAAAGCATAAATAAAAGCCAGCAAGCACATGTTAAATATCAACAGAACAACTCTTTCCAAAAAC--TCTTAGGACAGACCAATTTAAACACAATTGCCTGGCACCTATTATACACTACTACATCTAGGAAAGTCTGAAAG-AAGGCCAAAGGCCATAACCATTTTCAGGGTACTCTGAAG-----ACTCTGTATATCCTTCTACCAGACTGGGCTCTGTAGCTATCTTCCAACATCTAACATGAATGAATAAACATGCCTTAGAAATTGAATGCAAATACTTGACACAGGAGGCATGAAATCATATCCAAGAAAAATCCAGGGAGCAAAATCTGCTTAATGGGGTGGGAGGAACAGCCTCTGTCTTTGTCCCTGGAACCTCTCTAGCTTCTTCCACAGTTCCCCAAGGCATTCTATTGACCATGTTCCTTGACAGCAGCAGCCTACCTGTGTGTCAGCCATATTGGCCATGGATCAGTAGAAGAGAATGAAGAGCACAAAGGAATGAACATGGGCTGGGAGGAATGTCTGAGGAGGATGATGAAGGAAAAACTAGAGGAACCCTGGGTGTACTCCACATGTGACAGTAAGTGCCAA
+
+13 chrX 3044956 3044983 chrX 132767880 132767907 - 2133
+TGACATACTTCCTCCATCTAGGCCACAC
+tgacacacttcctccctcaaggccacac
+
+14 chrX 3045356 3046390 chrX 132767908 132769035 - 54561
+CTActccaacaaggccatatctcataaccctaccaaagattctactccctgatgactaagctttcaaatatatgagcctgtgagggacattcttatttaaaccactacaGCTAGAAAAAT-TACAAATGTTTTTATTTGCATTTCCCTGATGGATACAGATTGTTTTAAtaatttcctttttgctcctgtgataaaacactgaccaaaagcagcttggatgaggaaagggtt-----gtttagtttacagattgcagccta--------------------------------------------------------------------------------------------tctttgaggtaagctaaggcaaaaactaaagTTAATTTTT---AAAATATAGTAATTTCATGTAATGATTCATTGATTCAACAAAT----------TACTGGCTATGTTATAGGTcagtagttatcaacctttctaacactgcaactccttttgctataatgacctcaaccataaaattacttttgttgctacttcaaaactgtaattt-gtttctattatgaattataatgtaaatatatgatatgcagggtatctgatatatgaccgtcaaaagagttataacccacaagttgagaagcacAGTTCTCGATGCTTTTTAAGGTACTAGGATGTAACTGAATGAGACACAATGTTGTTGTGCTCAAGATGATTTTTTCTTTGAGTAAAACTGACA--AATGAGCTGGCACTATAgagatggttcagccagtaaagtagttacaggacaatgtaataacgtgagactgagtccccagcatccaaagaaaagtctgggcattgcaacttgcatctgtagtcacagtactggggaggtggagacatgagaaccactagagttttctgaacaaatttgtgaactcgagattcattgatagattctatctggaaaTTGAAGGAAACACCTTAATGACTTCAGGCC---------ATGTGCTTGTATACTCATGTGCTATACACATTTAAATacacgcacacatacatacacacacacacacatacacacacgcac-----------CACATTCTATTAAAAATAATTCACATGATGTCCTACAGTGAAAAATGGAGCAACAGGATCATGGGTTTAAAAAA
+ctactccagcaagtcc-----tcataatcctatcaaagattctactccctggtgactatgcatttaaatatatgagtccatgagggacattcttatttaaaccaccccaGCTAGAAAAAAACATAAATATTTTTATTTGCATTTCTCTGATGGATGCAGATtgttttaataatttcctttctgctcctgtgaaaaaacactgaccaaaagcagcttggatgaagaaagtatttttttatttagtttacagattaaagcctatctttttttggggggggggactgaacccagggccttgcgcttcctaggcaagcgctctaccactgagctaaatccccaacccctaaagcctatctttgagataagccaaggcaaaaactcaagTTATTCTTTTTGAAAATACAGTAATTTCACATCATCattcattgattcaacacatatttatggaatattggctatgATATAGATcagtggttcttaaccttcctaatgctacaaccctttatgctgtggtaaccacaaccataaaattacttttgtttctacttcataactgtaattttgttactgttatgaattataatataaatatgtgatatgcaggatatctgatgtatgacccctgaaagagttatgacccacaggttgagaaGTAGTGCTCTAGATCCTTTTCAAGAGACTAAGATGTAACTGAATGGGACACAGTGTTGT---ATTCAAGATGATAATTTTTTGGAGTAAAACTGAAAGTAATAAACTgg-actaaagagatagctcagacagtaaagtgcttgcag-------------------------tctccagcatccacagaaaagactgggcattgcaacttgcacctgtagtcacaggactggggatgtgaagacaggaggaccactggagtgtgctgagcaaattggtgagctctagattcattgagcgatcctatctcaaaactgaaggagacaccctaatgacttctggcctctacaaccatgcacttgtatacacaTGTGCTACACACATTTAAATtctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctntAATAAAAA-AATTCA-ATAATATCCTACAGTAAAAAA-----AAACCCATTCATGGGTTTAAAAAA
+
+15 chrX 3046548 3047589 chrX 132769039 132770071 - 59414
+CTTTGAGCAAGTGATGTTTAAGTCAAGACAGGAAAGACATCAACTTGGAAAGGTTGTGAAAAGCATTATAAGTAAGAAATACTTTTACTGCAAAAGTTTTCAAATTCAAAACAAACTTGTTACCTTTGAGAATGTACAGGCAACATTAGTGTGGCTGTCATAAACACTCAAAAAAAAAAAGTAATAACCCAGAGCAGTACTTTA--------------------------------------------AACCTTGCATAGTGGTACATAATTAAAATCCTAGCTCTGGAGAGACTAGGGCAGGAGGGTCATGACTACATAATGGTACACTCTCAAAAAGAAGAAAAACAACCCTCAAAGTAAGAAGCTCTTATAATATG-TTCCCAATTGTTTCTTTGTGAAAATGTAATGCCATTAACATGTTCTGTATCATTTTAGTACATTGTATCTGTATATGTGTTT---GttaatttataaaatattaaattttatCTATGACTAAAAATGAGTGAAAACTGAAAGTTAAAAATTAAAGAGTTGTCATCCAACAAGTATACCTGACATACAGCtttactgcaaattatttatctatgtaaattataacagaaaattgtatgtataaattatcaatttataaaagtatacaatagaaaattagcaatttattattatataaattgtttaaaattcattatttgatattttaatacataaatgaaatatatttagggagaaatttaacttcctagatattatttaagtaagtataacatttaaattttgcttaatgtaagaaaatgcattgctagatactcatataatgtcaatacattttctattcatcacttataaatagtgacaagttataaagcttct-------------gCTTGGTTAAAAGGTAAAAAGCATAAGGCACAAATACATTAAAGATAATGCATGAGACAAGGTGAGGGCAGCCAGTAGACAAACATAAGCTACTTGTTAATGCATGACTTCATGAATGATCACTGAATTGTAAATACTCCAGATGGTATGAAGAGCTCATCAGAGATGACCACTCAGACACCGTGTATCGCTAATTAAATGTGTTTAGTCTAGC
+TTTTGAACAAGTGATGTTTAATTCAAGACAGGAAAGACATCAACTTTGAAAAGTTATGAAAAGCTCT----GTAAGAAATAATTTTAGTGCAAAAGCTTTCAAACCCAAAACAAACTTGTTACCTTGAAGAATGCACAGAGACCATTAGTATGGCTGTCATACATACTCAAAAGAAAGAA--AATCTCCCAGAGCAGCACTTTACTACTTTTCATCATTGTGTTTTCCCGACTAAAAATACATTTTTTAAACTGGCATAGTGGTACACAATTGAAATCCTAGCTCCTGAGACTCTAGGGCAGGAGGGTCATGGCTACATAATGGTACACTCTCAAAAAGAAAGAA---AACTCTTAAAGTAAGAAGCTTCTAAAATATGTTTTCCAATTGTTTCTTCACGAAAATTTAATATCA-----GTGTTCTGTATCTTTTTAATACA-TGTATCTGCATATGTGTTTATAGTTAATTTATAAAATAGTAAACTTTATCTAGAACTAAGAATGAGTAAAATTTGTAAGTTAAAAATCAAAAAGTTGTTATCTAACAAGTACACTTGACATATGGTATTACTGAAAATTATT----TATGTACATTATAAC--AAAATTATATGTACAAATTATCAATTTATAAAATTATACAATAGAAA----------------------------------------TTTTGGTAACTTCATACATAAACGAAATGTACATAGGGAGACAATTAACTTCCTAGATA----TTTAGTAAATATAACATCTGAATTTTGCTTAATGTAAGAAAATACATTTctagatacacatataatatcaatatatt-----ttcatcacttataaacagtgacaagttataaagctacttaataagatgtaaactacatctaattttaaaaagcataagacacaaggatactaaagataatacatgagacgaggtgagggcagccagtagacatacacgggctacttGTTAATGAATGAATTCATGAATGATCTCTGAATTGTAAATTCTTCTGAtggtatggggagctcatcagagatgagcactcagacacagtgtatagccaataaaaagtctttattctagc
+
+16 chrX 3047590 3047634 chrX 14222368 14222417 + 1675
+CTGTTAGGG-----ACCTGGGTATAGCCCCAAGTGTTCAGAATGTGAGAT
+CTGGAAGGAACTACACCCAAGTACAGCCTTGAGTGTCCAGAACATAGGAT
+
+17 chrX 3047635 3047719 chrX 14222571 14222648 + 3429
+TAGTTAAACCTGGATTGGTCTCAGCAAGACTATAAGATAAAGGAACCTTACACCTTAACACTGTTTTGCCCAGTTACAAAGGTac
+TAGTTTAACCTGCAGTGGCCTCAGCAAGAATACAAGATGGAGGA-------ATTTCTGCATTGCCTTGCCTGCTGACAAAGGGAC
+
+18 chrX 3049058 3049300 chrX 132770073 132770321 - 14281
+ctcctgtaccatgcctgcctggatgctgccatgctcctgcctagatgatagtagactgaacttctgaacctctaagccagcccaaattaaatgttgtccttataaaagatgccttggtcatagtgt----tctcatcagtaaaaccctaa----GACAGAAGTTGGTACCAGATACGGGGGTTATTTGTTTCTTGAGGAATCATGAACTCTGAATACTGTG--------CCCAGGGGCATTCTGAAGATCTCATTAGAA
+ctcctgcaccatgcctgcctggatactcccatactcccaacttgatgataatggactgaacctttgaacctgtaagccagccccaattaaatgttgtccttataagagttgccttggtcatggtgtctgttcacagcagtaaaatcctaactaagacaGGAC----------ATATGGGTTTTATCTGCTTCTTGGGGAATCATGAACTCTGAACATTGTGCTAATATACCTAGGGCCAttctgaagatcatattagaa
+
+19 chrX 3049301 3049850 chr15 879492 880081 - 31160
+GGTTTTGTTAGATATTCTTTCAGATTAAAACATTCCATCCTAGAAGGAGGAAGAGGGTTTATAAAACTCAAGGACTATCACAATTTAA--GACTAATGAAACTCTGGGAA-TTCACAAAAGTCACATGGCCATCCCCAATGTTCTACAAGTAGTGAACAATTGCAGGCAGGAGTG-AGGGGTTTCCTTCAGTGGGGATTCCTGAAAGTTGGTCAGAGAGCTCTAGGGACGTAGTTTTCATTAATCATTATCAACACTGAGTAAGGCTTTCTGGTAATGGAGCTGACATTGAAtcatctgtgttcctttcagtgacctcaataaactcattggttcactaagctaaaatcaggtgCAATGATGTTGGCTTTGTTTCACTC--------------------------------------------AACGTCCTACTTGGAGTAAACATATACTTGTTCATATATTTTCAGGAAAATTTACACAACAGAAGGTAGAAACTTCTAAACAAAAGAATATTTCTCTTTGTTAGTTTAGTCTACTCACTCTATATGGAAAATAAGGATGGAAAAGAACACCACCACCCCCTACAttaatttgggc
+GTTTTTCTTAGGTGTTCCTTCAGATTAAAATATTCCATG-TGGAAGGAGGAAAAAGGTTTATAAATCTCAAGGACTATCTCAATTTAAAAGACTCATGAAACTCTGAAAACTTAACAAAAATCACATAGCCTCCCCCAATATTACATAAGTAGTGAACAATTGTGGGCAGGAGTGAAGGGGTTTCCTTCAGTGTGGGTTTTtgcaagttgggcagagagttctagggaatcaattttcataaatcagcatcagcattggggcaagctttctgttaatggagctgatg-tgagtcatccgtgttcctttcaatgacctcaacaaactcattggttctccaagctaaaatcaggtgctatggtgtagtctttgtttcactctgattaattaattaattaattaattaattaatcaagtaattgttaatgtcctacttg--gtaaacatacgtttatctaactattttcaggaaaattcacacaacaGAAGGTCGAAACTTCTAAACAAAAGAGTATTTCTCTTTGTTAGTTGAGTCTA--CACTCGATAGGGAAA--AATGAAGGAAAAGAAATCCCCCATTAAGTAAACTCACTTAGAC
+
+20 chrX 3055000 3055956 chrX 27929767 27930764 + 46154
+CATCTGTCTAAGATGt---aattatatattttattaataa---ttatattaGCCTAGTTGTTAAACAAG----TTAAGTGTTTCTAATgtgatcctatttaaatataataag-------------cttaactgcataaatgccaaaaatatctccttctctcactcaaggtaaaggcaaaattcacctgtagagtttgtaacctgcagagctttgagctttctgactccactatgacttctagaaaatcacct--cacagttctctgcctccctccatcagttccagccatgcctctatcccagctgcttctcctcatgcatgcaaggtcttctctgacaactgagcctcagcaactgtcatcactttagctggaatgcatatttctcTTGACTGCTGCTGGAGGCCACAGTCTACCTGCATGT-----------------------------------------TTTCATTCCACACCCAAAGGTTCCTTGATAACTTTCCTGGCTATTCTGACTCTCTGAAAAGAATGCTCACCCTGGAATTTCATTTCCTTGAAGCTAGGCCTTGTCATGCTCCCTCTTATCACTTACCAATATGAAAATATTTCATACTGACTTAATAGCTACATGGCTATATGGCTCAtttcccagactaggatgagaactccatgaggataagatctgttcatttgctgcctctggtccttgcagtgtccaaaacactgcactgCAGAGACCACTCACAGTGTTTATGGGACATAGGTAAAACAAATGAACTGAGTGATAATCCATGGGATTGAGCATGTAAAATTACACAGGCATGCCTGGGTCTAGCCATATAGCTACCTACTAATGCACTTCCCACCAGGATCTAGGCTTGCAGGGCACGGTGAAATAGGGCAACTGGAGGCATGGCCAAGAGAAATCTTTCCAAGGTTGAAAT------GACTTTTCCATATACCAGGGTGATTTTATCCTTTTTTTAGAATGTGAGGCCTATTCCAAAGCCATTACATGATATGAACt
+CACCTACTTACAATGTGGAATTTATATATTTGATTTTCATGCTCCAAATT--CCAAGATTTTTGAGAAGATTTTCAGGAGTTGCTGcagtgtgcctgttaaaatatgacaaaaactatgagatgcttcaactttaaaagcactaa---catgtccccctctcactcaaggtaaaagcaaaattcctctgtagaagttttaacctgcagggctttgggctctctgacacccctgtgacttctgagaaatcacttttcacaattttctaccacccttcatcatatccagccatgccttcatcccagctgcttctcctcatgcatgccaggtcttctctggc---------ccagcaattgtcatcacataagctggaatgcacattccccTTGACTGCTGTTGGAtctctctctctctctctctctctctctctctctctctctctctctctctctctctctcCTTGTTCCATTCTAAACCTAGAGCTTCCTTGATACCTTTCCTGACCATTGTAACTCTCTGAAAAGAATGCTGGCCCTGAAATTTCATTTTCTTGAACCTAGACTTGGT-GTGTCCCCTCTTATCACTTACCAATATGAAAATGCTTCAGATAGGCTTATTAGCTACAGGAATATATTGCTCATTTCCCACACTAGGAGGAGAACTCCAAAGGGATACGATCTGTCCATTTGCTGCCTCTGCTGACTGCAGTATATAGAACACTGCATGGC----------CAGAGTGTTTATGTGACAAAGGTAAAACAAATCAATTGGGTGAGAATCTGTGGAATCAAGCATGTAAAGTGAGACAAGTATCCCTGGGTCTAGCCATAATGCTATA----AATGCACTTCCTAACAGGGTATGAGCTTGAAGGGCAGGGTAAAGCAGGGCAACTGGAGGCATGCTCAACAGAAACCTTTCCAAGGTTGAAATGTGATGGCCTCTTCCTTACACCATGGTGCTTGTATCC--TTGTTGGAATGTGGGTCCTGTTCAAATGCCTTTACATGATATGAACT

File test-data/1.bam

Binary file added.

File test-data/1.bed

View file
+chr1	147962192	147962580	CCDS989.1_cds_0_0_chr1_147962193_r	0	-
+chr1	147984545	147984630	CCDS990.1_cds_0_0_chr1_147984546_f	0	+
+chr1	148078400	148078582	CCDS993.1_cds_0_0_chr1_148078401_r	0	-
+chr1	148185136	148185276	CCDS996.1_cds_0_0_chr1_148185137_f	0	+
+chr10	55251623	55253124	CCDS7248.1_cds_0_0_chr10_55251624_r	0	-
+chr11	116124407	116124501	CCDS8374.1_cds_0_0_chr11_116124408_r	0	-
+chr11	116206508	116206563	CCDS8377.1_cds_0_0_chr11_116206509_f	0	+
+chr11	116211733	116212337	CCDS8378.1_cds_0_0_chr11_116211734_r	0	-
+chr11	1812377	1812407	CCDS7726.1_cds_0_0_chr11_1812378_f	0	+
+chr12	38440094	38440321	CCDS8736.1_cds_0_0_chr12_38440095_r	0	-
+chr13	112381694	112381953	CCDS9526.1_cds_0_0_chr13_112381695_f	0	+
+chr14	98710240	98712285	CCDS9949.1_cds_0_0_chr14_98710241_r	0	-
+chr15	41486872	41487060	CCDS10096.1_cds_0_0_chr15_41486873_r	0	-
+chr15	41673708	41673857	CCDS10097.1_cds_0_0_chr15_41673709_f	0	+
+chr15	41679161	41679250	CCDS10098.1_cds_0_0_chr15_41679162_r	0	-
+chr15	41826029	41826196	CCDS10101.1_cds_0_0_chr15_41826030_f	0	+
+chr16	142908	143003	CCDS10397.1_cds_0_0_chr16_142909_f	0	+
+chr16	179963	180135	CCDS10401.1_cds_0_0_chr16_179964_r	0	-
+chr16	244413	244681	CCDS10402.1_cds_0_0_chr16_244414_f	0	+
+chr16	259268	259383	CCDS10403.1_cds_0_0_chr16_259269_r	0	-
+chr18	23786114	23786321	CCDS11891.1_cds_0_0_chr18_23786115_r	0	-
+chr18	59406881	59407046	CCDS11985.1_cds_0_0_chr18_59406882_f	0	+
+chr18	59455932	59456337	CCDS11986.1_cds_0_0_chr18_59455933_r	0	-
+chr18	59600586	59600754	CCDS11988.1_cds_0_0_chr18_59600587_f	0	+
+chr19	59068595	59069564	CCDS12866.1_cds_0_0_chr19_59068596_f	0	+
+chr19	59236026	59236146	CCDS12872.1_cds_0_0_chr19_59236027_r	0	-
+chr19	59297998	59298008	CCDS12877.1_cds_0_0_chr19_59297999_f	0	+
+chr19	59302168	59302288	CCDS12878.1_cds_0_0_chr19_59302169_r	0	-
+chr2	118288583	118288668	CCDS2120.1_cds_0_0_chr2_118288584_f	0	+
+chr2	118394148	118394202	CCDS2121.1_cds_0_0_chr2_118394149_r	0	-
+chr2	220190202	220190242	CCDS2441.1_cds_0_0_chr2_220190203_f	0	+
+chr2	220229609	220230869	CCDS2443.1_cds_0_0_chr2_220229610_r	0	-
+chr20	33330413	33330423	CCDS13249.1_cds_0_0_chr20_33330414_r	0	-
+chr20	33513606	33513792	CCDS13255.1_cds_0_0_chr20_33513607_f	0	+
+chr20	33579500	33579527	CCDS13256.1_cds_0_0_chr20_33579501_r	0	-
+chr20	33593260	33593348	CCDS13257.1_cds_0_0_chr20_33593261_f	0	+
+chr21	32707032	32707192	CCDS13614.1_cds_0_0_chr21_32707033_f	0	+
+chr21	32869641	32870022	CCDS13615.1_cds_0_0_chr21_32869642_r	0	-
+chr21	33321040	33322012	CCDS13620.1_cds_0_0_chr21_33321041_f	0	+
+chr21	33744994	33745040	CCDS13625.1_cds_0_0_chr21_33744995_r	0	-
+chr22	30120223	30120265	CCDS13897.1_cds_0_0_chr22_30120224_f	0	+
+chr22	30160419	30160661	CCDS13898.1_cds_0_0_chr22_30160420_r	0	-
+chr22	30665273	30665360	CCDS13901.1_cds_0_0_chr22_30665274_f	0	+
+chr22	30939054	30939266	CCDS13903.1_cds_0_0_chr22_30939055_r	0	-
+chr5	131424298	131424460	CCDS4149.1_cds_0_0_chr5_131424299_f	0	+
+chr5	131556601	131556672	CCDS4151.1_cds_0_0_chr5_131556602_r	0	-
+chr5	131621326	131621419	CCDS4152.1_cds_0_0_chr5_131621327_f	0	+
+chr5	131847541	131847666	CCDS4155.1_cds_0_0_chr5_131847542_r	0	-
+chr6	108299600	108299744	CCDS5061.1_cds_0_0_chr6_108299601_r	0	-
+chr6	108594662	108594687	CCDS5063.1_cds_0_0_chr6_108594663_f	0	+
+chr6	108640045	108640151	CCDS5064.1_cds_0_0_chr6_108640046_r	0	-
+chr6	108722976	108723115	CCDS5067.1_cds_0_0_chr6_108722977_f	0	+
+chr7	113660517	113660685	CCDS5760.1_cds_0_0_chr7_113660518_f	0	+
+chr7	116512159	116512389	CCDS5771.1_cds_0_0_chr7_116512160_r	0	-
+chr7	116714099	116714152	CCDS5773.1_cds_0_0_chr7_116714100_f	0	+
+chr7	116945541	116945787	CCDS5774.1_cds_0_0_chr7_116945542_r	0	-
+chr8	118881131	118881317	CCDS6324.1_cds_0_0_chr8_118881132_r	0	-
+chr9	128764156	128764189	CCDS6914.1_cds_0_0_chr9_128764157_f	0	+
+chr9	128787519	128789136	CCDS6915.1_cds_0_0_chr9_128787520_r	0	-
+chr9	128882427	128882523	CCDS6917.1_cds_0_0_chr9_128882428_f	0	+
+chr9	128937229	128937445	CCDS6919.1_cds_0_0_chr9_128937230_r	0	-
+chrX	122745047	122745924	CCDS14606.1_cds_0_0_chrX_122745048_f	0	+
+chrX	152648964	152649196	CCDS14733.1_cds_0_0_chrX_152648965_r	0	-
+chrX	152691446	152691471	CCDS14735.1_cds_0_0_chrX_152691447_f	0	+
+chrX	152694029	152694263	CCDS14736.1_cds_0_0_chrX_152694030_r	0	-

File test-data/1.bed.spaces

View file
+chr1 147962192 147962580 CCDS989.1_cds_0_0_chr1_147962193_r 0 -
+chr1 147984545 147984630 CCDS990.1_cds_0_0_chr1_147984546_f 0 +
+chr1 148078400 148078582 CCDS993.1_cds_0_0_chr1_148078401_r 0 -
+chr1 148185136 148185276 CCDS996.1_cds_0_0_chr1_148185137_f 0 +
+chr10 55251623 55253124 CCDS7248.1_cds_0_0_chr10_55251624_r 0 -
+chr11 116124407 116124501 CCDS8374.1_cds_0_0_chr11_116124408_r 0 -
+chr11 116206508 116206563 CCDS8377.1_cds_0_0_chr11_116206509_f 0 +
+chr11 116211733 116212337 CCDS8378.1_cds_0_0_chr11_116211734_r 0 -
+chr11 1812377 1812407 CCDS7726.1_cds_0_0_chr11_1812378_f 0 +
+chr12 38440094 38440321 CCDS8736.1_cds_0_0_chr12_38440095_r 0 -
+chr13 112381694 112381953 CCDS9526.1_cds_0_0_chr13_112381695_f 0 +
+chr14 98710240 98712285 CCDS9949.1_cds_0_0_chr14_98710241_r 0 -
+chr15 41486872 41487060 CCDS10096.1_cds_0_0_chr15_41486873_r 0 -
+chr15 41673708 41673857 CCDS10097.1_cds_0_0_chr15_41673709_f 0 +
+chr15 41679161 41679250 CCDS10098.1_cds_0_0_chr15_41679162_r 0 -
+chr15 41826029 41826196 CCDS10101.1_cds_0_0_chr15_41826030_f 0 +
+chr16 142908 143003 CCDS10397.1_cds_0_0_chr16_142909_f 0 +
+chr16 179963 180135 CCDS10401.1_cds_0_0_chr16_179964_r 0 -
+chr16 244413 244681 CCDS10402.1_cds_0_0_chr16_244414_f 0 +
+chr16 259268 259383 CCDS10403.1_cds_0_0_chr16_259269_r 0 -
+chr18 23786114 23786321 CCDS11891.1_cds_0_0_chr18_23786115_r 0 -
+chr18 59406881 59407046 CCDS11985.1_cds_0_0_chr18_59406882_f 0 +
+chr18 59455932 59456337 CCDS11986.1_cds_0_0_chr18_59455933_r 0 -
+chr18 59600586 59600754 CCDS11988.1_cds_0_0_chr18_59600587_f 0 +
+chr19 59068595 59069564 CCDS12866.1_cds_0_0_chr19_59068596_f 0 +
+chr19 59236026 59236146 CCDS12872.1_cds_0_0_chr19_59236027_r 0 -
+chr19 59297998 59298008 CCDS12877.1_cds_0_0_chr19_59297999_f 0 +
+chr19 59302168 59302288 CCDS12878.1_cds_0_0_chr19_59302169_r 0 -
+chr2 118288583 118288668 CCDS2120.1_cds_0_0_chr2_118288584_f 0 +
+chr2 118394148 118394202 CCDS2121.1_cds_0_0_chr2_118394149_r 0 -
+chr2 220190202 220190242 CCDS2441.1_cds_0_0_chr2_220190203_f 0 +
+chr2 220229609 220230869 CCDS2443.1_cds_0_0_chr2_220229610_r 0 -
+chr20 33330413 33330423 CCDS13249.1_cds_0_0_chr20_33330414_r 0 -
+chr20 33513606 33513792 CCDS13255.1_cds_0_0_chr20_33513607_f 0 +
+chr20 33579500 33579527 CCDS13256.1_cds_0_0_chr20_33579501_r 0 -
+chr20 33593260 33593348 CCDS13257.1_cds_0_0_chr20_33593261_f 0 +
+chr21 32707032 32707192 CCDS13614.1_cds_0_0_chr21_32707033_f 0 +
+chr21 32869641 32870022 CCDS13615.1_cds_0_0_chr21_32869642_r 0 -
+chr21 33321040 33322012 CCDS13620.1_cds_0_0_chr21_33321041_f 0 +
+chr21 33744994 33745040 CCDS13625.1_cds_0_0_chr21_33744995_r 0 -
+chr22 30120223 30120265 CCDS13897.1_cds_0_0_chr22_30120224_f 0 +
+chr22 30160419 30160661 CCDS13898.1_cds_0_0_chr22_30160420_r 0 -
+chr22 30665273 30665360 CCDS13901.1_cds_0_0_chr22_30665274_f 0 +
+chr22 30939054 30939266 CCDS13903.1_cds_0_0_chr22_30939055_r 0 -
+chr5 131424298 131424460 CCDS4149.1_cds_0_0_chr5_131424299_f 0 +
+chr5 131556601 131556672 CCDS4151.1_cds_0_0_chr5_131556602_r 0 -
+chr5 131621326 131621419 CCDS4152.1_cds_0_0_chr5_131621327_f 0 +
+chr5 131847541 131847666 CCDS4155.1_cds_0_0_chr5_131847542_r 0 -
+chr6 108299600 108299744 CCDS5061.1_cds_0_0_chr6_108299601_r 0 -
+chr6 108594662 108594687 CCDS5063.1_cds_0_0_chr6_108594663_f 0 +
+chr6 108640045 108640151 CCDS5064.1_cds_0_0_chr6_108640046_r 0 -
+chr6 108722976 108723115 CCDS5067.1_cds_0_0_chr6_108722977_f 0 +
+chr7 113660517 113660685 CCDS5760.1_cds_0_0_chr7_113660518_f 0 +
+chr7 116512159 116512389 CCDS5771.1_cds_0_0_chr7_116512160_r 0 -
+chr7 116714099 116714152 CCDS5773.1_cds_0_0_chr7_116714100_f 0 +
+chr7 116945541 116945787 CCDS5774.1_cds_0_0_chr7_116945542_r 0 -
+chr8 118881131 118881317 CCDS6324.1_cds_0_0_chr8_118881132_r 0 -
+chr9 128764156 128764189 CCDS6914.1_cds_0_0_chr9_128764157_f 0 +
+chr9 128787519 128789136 CCDS6915.1_cds_0_0_chr9_128787520_r 0 -
+chr9 128882427 128882523 CCDS6917.1_cds_0_0_chr9_128882428_f 0 +
+chr9 128937229 128937445 CCDS6919.1_cds_0_0_chr9_128937230_r 0 -
+chrX 122745047 122745924 CCDS14606.1_cds_0_0_chrX_122745048_f 0 +
+chrX 152648964 152649196 CCDS14733.1_cds_0_0_chrX_152648965_r 0 -
+chrX 152691446 152691471 CCDS14735.1_cds_0_0_chrX_152691447_f 0 +
+chrX 152694029 152694263 CCDS14736.1_cds_0_0_chrX_152694030_r 0 -

File test-data/1.bigbed

Binary file added.

File test-data/1.bigwig

Binary file added.

File test-data/1.customtrack

View file
+track name="User Track" description="User Supplied Track (from Galaxy)" color=0,0,0 visibility=1
+chr7	127475281	127491632	NM_000230	0	+	127486022	127488767	0	3	29,172,3225,	0,10713,13126,
+chr7	127486011	127488900	D49487	0	+	127486022	127488767	0	2	155,490,	0,2399,

File test-data/1.fasta

View file
+>hg17
+gtttgccatcttttgctgctctagggaatccagcagctgtcaccatgtaaacaagcccaggctagaccaGTTACCCTCATCATCTTAGCTGATAGCCAGCCAGCCACCACAGGCAtgagtcaggccatattgctggacccacagaattatgagctaaataaatagtcttgggttaagccactaagttttaggcatagtgtgttatgtaTCTCACAAACATATAAGACTGTGTGTTTGTTGACTGGAGGAAGAGATGCTATAAAGACCACCTTTTAAAACTTCCC-------------------------------AAATACT-GCCACTGATGTCCTG-----ATGGAGGTA-------TGAA-------------------AACATCCACTAAAATTTGTGGTTTATTCATTTTTCATTATTTTGTTTAAGGAGGTCTATAGTGGAAGAGGGAGATATTTGGggaaatt---ttgtatagactagctttcacgatgttagggaattattattgtgtgataatggtcttgcagttaca-cagaaattcttccttattttttgggaa---gcaccaaag----tagggat---aaaatgtcatgatgtgtgcaatacactttaaaatgtttttg-----ccaaaataatt----------------aatgaagc--aaatatggaaa-ataataattattaaatctaggtgatgggtatattgtagttcactatagtattgcacacttttctgtatgtttaaatttttcatttaaaaaaaaactttgagc-----tagacaccaggctatgagctaggagcatagcaatgaccaa----------------------------------------------------------------------------------------------atagactcctaccaa--------------------------------------------------ctc-aaagaatgcacattctCTGGGAAACATGTTTCCATTAGGAAGCCTCGAATGCAATGTGACTGTGGTCTCCAGGACCTG-TGTGATCCTGGCTTTTCCTGTTCCCTCCG---CATCATCACTGCAGGTGTGTTTTCCCAAGTTTTAAACATTTA------CCTTCCCAGTGGCCTTGCGTCTAGAGGAATCCCTGTATAGTGGT-ACATGAATATAACACATAACAAA-AATCATCTCTATGGTGTGTGTTGTTCCTGGGGTTCAattcagcaaattttccctg-ggcacccatgtgttcttggcactggaaaagtaccgggactgaaacagttgatggccca-atccctgtcctct---taaaacctaagggaggagaTGGAAAGGGG-CACCCAACCCAGACTGAGAGACAGGAATTAGCTGCAAGGGGAACTAGGAAAAGCTTCTTTA---AGGATGGAGAGGCCCTAGTGGAAT-GGGGAGATTCTTCCGGGAGAAGCGATGGATGCACAGTTGGGCATCCCCACAGACGGACTGGAAAGAAAAAAGGCCTGGAGGAATCAATGTG-------CAATGTATGTGTGTTCCCTGGTTcaagggctgg-gaactttctcta-aagggccaggtagaaaacattttaggctttctaagccaag--gcaaaat-tgaggatattacatgggtacttatacaacaagaataaacaatt---tacacaattttttgttgacagaattcaaaactttat----agacacagaaatgcaaatttcctgtaattttcccat-gagaactattcttct--tttgttttgttttgcgacAGGGTTGCGCtgatcctcccgcctcagtctccctaagtgctgagatgttgcaggaagtcagggaccccgaacagagagatcggctggagccgtggcagaggaacataaattttgaagatttcattttaatatggacacttatcagttcccaaataatacttttataattttttatgcctgtctttgctttaatctcttaatcctgttatcttcataagctaaggatgtacgtcacctcaggaccactgtgataattgtgttaactgtacagattgattgcaaaacatgtgtgtttgaacaatatgaaatcagtgcaccttgaaaaagagcagaataacagcaatttttagggaacaagggaagacaactataaggtctgactgcctgcggggtcgggcaaagggagccatatttttcttcttgcagagagcctataaatagacctgcaagtaggagagatattgctaatttcttttgctagcatggaatattaatattaacaccctgggaaaggaatgcattcctggggggaggtctataaatggccgctctgggaatgtctatcctacgcaatggagataaggactgagatacgccctggtctcctgcagtaccctcaggcttactagggtggtgaaaaactccgccctggtaaatttgtggtcagaccagttttctgctctcgaacactgttttctgttgtttaagatgtttatcaagacaatacgtgcaccgctgaacacagacccttatcagtagttctcctttttgccctttgaagcatgtgatctactccctgttttacaccccctcaccttttgaaacccttaataaaaaacttgctggttt-gaggctcaggtgggcatcacagtactaccgatatgtgatgtcacccccggcggcccagctgtaaaattcctctctttgtactctctctctttatttctcagccagctgacacttatggaaaatagaaagaacctacgttgaaatattgggggcaggttcccccaataTCTGGTGCCCAACGTGGGAtactgagattacaagcatgagccactgcatctggcctcttcttttgatttttttttttcaaacttttacaaatgtagaaaccattcttagcttttgggcattaccaaacccggcagtgg-caggctcggttcaccaacgtcatttgcagttccccgCTTTATGTTATGGgttttgttttgttttgtttttttt-attgagacagagtttcactcttgttgcccaggctgtagtgcaatggtctgatcttggctcactgcaacctccacttcccaggttcaagccattctcctgcctcagcctctcaagtagctgggattacagacactcaccaccacacctggctaattttgtatttttagtagagatgaggtttcaccatgttggccaggctggtctcgaaatcctgacctcaggtgatccacccaccttggcctcccaaagtgctgggattacaggcttgagctaccacgcctggctGGGTTGGTTCTCAATGGAGTGGTTTGTTTTTGGAGCTGCTCT-GCGCAGtggggaccagaataggcctg-------------------ggttcctagcccattgctattcctt----accagctgtggattctaaggaaagtcatttaacctcgctggaccttag-attcctcatccctgaaGCCCAAGGGTaaaacaaaacaaaacaaaacaaaacaaaccaaCCCATCATGTAAAGCGGGGAACTACAAACGATACAGGTGAAACATGCCTACCACACCACTCACAGGCT--ATGATGACAAAAACGTGGCTACATCTGGGACCACCCCCCAACCCCCACTTTGTACGTAGGAAATACGGAGTTGAGGATGGAGACCCACAGTATGTCCAGAGTGTCCCCAAAGGCCACAGTGCCCGCCTGGAGCCCTCCAGAGAGCGTGCACTCCCTGGGGTGCCAGCCAGAGACAACTTGCCCTGAGGCTTGGAACTCGATTCTCCGCGTGCCAGAGAAGGGGTGGGACTTCAGAACCCCCAACCCCGCAATCTGGGTCGGGGAGCCTGGCGCACTGCGGGCCGCTCCCTCTAACCCTGGGCTTCCCTG------GCGTCCAGGGCCGTCGG-----------GGCCGAGTCCCGATTCGCTCCCACCCCGAAGCCGCGCCAGGACCAACGAGGGCGCAGCCGTATGCCCCAGCCCGCTCCGCGGAGCCCCTCACAGCCAcccccgccccgaccgcgccccgcgcggcTCGAAGCACCTTCCCAAGGGGCTGGTCCTTGC----------GCCATAGTCGCGCCGGAGCCTCTGGAGGGACATCAAGGATTTCTC-GCTCCTACCAGCCACCCCCAAATTTTTGGGAGGTACCCAAGGGTGCGCGCGTGGCTCCTGGCGCGCCGAGGCCCTCCCTCGAGGCCCCGCGAGGTGCACACTGC---------GGGCCCAGGGCTAGCAGCCGCCCGGCACGTCGCTACCCTGAGGGGCGGGGCGGGAGCTGGCGCTAGAAATGCGCCGGGGCCTGCGGGGCAGTTGCGCAAGTTGTGATCGGGCCGCTATAAGAGGGGCGGGCAGGCATGGAGCCCCGTAGGAATCGCAGCGCCAGCGGTTGCAAGGTAAGGCCC-CGGCGCGCTCCTTCCTCCTTCTCTGCTGGTCTTTCTTGGCAGGCCACAGGGCCCCACACAACTCTGGATCCCGGGGAAACTGAGTCAGG-AGGGATGCAGGGCGGATGGCTTAGTTCTGGACTATGATAGCTTTGTACCGAG-----TTCTAGCCAGATAGAAGGTTACCGGGAGCTGGGGAGCGTTGGATTTGCTGCTGGGCTGTGCCGGTGCCCAGAAGGCA------GGACCTTGCAGAACCAGCCAGGTCCCTGGGAGACTGTCAGACCCACCAACCTGGTGGCATTCGCAGAGCTGAGATGCATTGGAAATTGCCTTGGGCACATCCCCAAAGATCAGGATGTCCCACCCCAGTCTGAAGGAGA---TAAAGTTGGGGGTAGGAGAGACGCAG-ATGCAAGTGATCAGTCTC---AGTCCCAGACATTGCCTTGCTCTGCGGGTAGGAATTCAGGATTCATTTTCCAGGGAAG--------TTCCTGACCTCTGAATGAGAGGGGCTGTGTAAGGCCAATGCCTGGG-AGGAAGGCAAGGATGAGTAGAGGTGGGGGGAAACAAGTGTCAGGAAGA--------------------------------------------CTCAAA---------ATCTTC--------------------------------------------------------------CAGAGAAATTGT-----GCAGGGTCTTACCAGATCTGTCCTCAAAGCCATGCAAATTGCCTTCTTTGCAATGCAT-ACAATGAGGTGTCTCTGGGGGTCAGAACTGG-----------------------TTATTAGGGAACTTCTAGCCAGGACTGCTAAATACGCGCTGTTGG---------CCCACCAGGCTCACCTATAGCCT-TCCTTCAGTCTGGGCTTGGTTTGGATTTCACTGTGGGTGCCATCGCCTTTACACTCCTGTTTCTATAGTTTAAAGATAGTGGTGCTTTGGGAAAG---TGACTCCTTAAATACAGTTAGGTCCAAGTGA-GACAAGTGGCCTGGCTGTCATTTCAGAATAGCAGCTTCCAAGAGG----------TGATTAATTTCTGTTGGAAGGGTGAT-CTTTGGGGAGGT--GGGTGAAGAGCAGAGACTTGGTGGTACCGTTCCAGGAGCACAGGCTCTCT-----TCCTTTGCA--GTGCAGAATGACCTCTGGCAGCCGGAGTTGTGTTTGTT--------CTGTAGGATTCTGAGGTGGGCCATGGGCAGCTGGAACTGGG-----GAATTTTGCCAATCTCTTTCATATTAGGATTGTCTGCAGAACCAGATATGGAGG------CTTCTAGCAACGTGAGTGCTCCTGTTCTAATGCCCTTAGAAACAAGAAGGCCACACTGATCATTTCTCTCACTTAGGCAGGGAGACAAGGCAAGAGAGAAACAGT-----------------GGATGC--TTTTAGGTTCTTTCCCTTCCCAAGCAGTTGTGGACATTGGGCTGA-GGGGAACATTTCCACATTGGCTAAAGGAGCGTCCTCCTCATATTTTGTACATTTTATACCCAA--AATAA-CTCTTCTTGGTATTT-GGGGAAATATTTTCCTCCCCGTCC------------ATTCCAGGAAATGGCTCCAAGTGCCAAGGACAGAGCCAGGGAAGTTGCAATGAATTCCTGCCCGTCAGCCCCAGGCAGATGCCTTGCACGTCTGAGTGGCCCATGCAGAGCGTGGAGGTGGCCGCC----------------ACGGAACC-TGGGTCAATGT-CCCACCCCCG----CTTAGATGCCA-CCAGGGG--CGTGGGAGCCAAGGAG--AGAAGAGGGGCTCCAGGAAGGTAGAGTCCTTGTGTCTTGTGCATCTGTGAACAGCACTGGTATGATTTAAAGGAAAATTGAGCCAAATTTTCCGGCAGTCAGTT-----ACCCCATCCCCACCGGGGTAGGAGTCTGGCAGCCGCAGCTCCATTCTGGCCAGTCGGCAGAGAGCCTTGAAATTCTTCTTTGTCCACACAGTTGTCTCAGAGAAACAG--AGAGGTT-GTTTCTGCTTAAAAACAACACACTTGGTGTCTGGGCCCACAGACTCCTTTGCACTTATTCCACGTGTGACAGCCAATGTGCCTCGTTGCTTAGCAGACAGCATGTTACCGTCTTTCCTGCTCAGTTTGTTAG--------------CTCTATGGAATGGAATTTATAATCAATGCCCATACCAACATTTCACTAATATCATAGGAGATTTAGTCTCCATCTGGGTGTACATTACATTTGC--TCTGGGG-TGCTCCAGGC--TGGGGGGTTGCCAAGGAAGAGAAGAGAAACCGCAGAGAAGAC---GGGAGGGCAGGGCAGGGGTCTCTGAGAAGGGGAGGGGTCCCAGAGTGCAGGAGCAGGAGCCAGGCTC---------ATGAAAGGGGCCACGGGCGGGAGTATCCAGGGACGGCAGTCAAGATGGAGCACAGCTTAGG--AAGCTGAAGGGAATCCTGGCCCACCTGGGTGCTAGAGGGCACATAGGAAGTGCAGGAAGCAGACCAAGGTCCCCAAGAGAGGGAGACCTGGACGCTGAAGCATTTTCTGTCTTTATTAAG-------------ACAACTCCGTAAGAATTCCTGCTGGGCCAAAGTGAATTCTAGGATGCGACTTTAAGATGGGAGCAAGCGAACCATTGAGGAGGCAGGTTACCCTAGTTAGCCAATGCAGATCGAGAATGGGAAATCTTTCatttattcatgcaacagatatttaacgaagccctgccgtgttccaggcctgtgatagatgctggaacaggtacagaga----------tAc-------aggtgtcattaattgatcaggg--caacctctc---cttctgagt--cttgctggagcttcagatgc-ccctcacacagagctcgagggagcctc-aacaattgatcagaagtcaggcaccatggctcacgcatataatcccagcactttgggaggccaaggcaggtggatcactggagcccaggagttccagatcagctggggcaacatggcaaaaccccatctctattaaaaaaaaaaaaagtaactggatgtgatggtacacacctgtagtcccagctacttgggaggctgagaggtgggagaattgcttgagcccgggaagtcgggggtccagtgagccttgatcacaccactgcactccagcctgagtgacagagcaagaccctgacacacacacacacacacacacacacacacacacagattagagctgaaacaggagtagaaacctatctg-tatctctgATGA-GATCAGATC---------TTTCTGATGAACAGAAAGAATGTAACCCCTGTACTCACACCCTCTCTGCTGGTTACATATGTTAACACGATTTCTCAAATGAGGCTTTTGGTTGCAAATAAGAGAAAATCACTCACGCT-GGCCCTGTG--TTTTTCAAATTGTTTATTGTGATCAACATTTGAAAAAAGAGCCGAGACTCTCAAGAGTGCATTACCCACGGTAAGGGTGAATTTT-ACTTCTTGACACTTATTTCTCTTACATGTATCTATCTGTCTC-----AAATGAAAAATATATTTAGAAAGTTGAAAGCTATCCAAGTGAGTATAAGAAAAGAGTATCTCACCCTGAAGGCTAAGGACAGGGAGGGC---------------------------CACCAGGCCTCACGAGGACCCAGGAACCACAAAGAAGGCT-AGGAAGGAGCACAGGCGGTGACCATACTCTGGCTCAGTGGCTATGTGGGCTCTGGTCTCTCTCAGCTGTTCCATGCATATGAGGCCAAATGTGGCTACCCTAGAGCTTCTGAGCCCTCAACAGAGATGAACTGGACTCTCTGCAGCCCCACTCTAAATTCCTAAGAGAGAAGTTGATTGACCCAATCAGGGTCAGGAGAAGGAAGGGAGGAGGAAAGGGAGGAGAGAAGAGCCTCTTCGTCTCTTGCCTACCACTGGCCAGGCAATTGTAGCCAAGGGGGCTGGAGTGTAAATGCAAACATAGCCATCAAGGGTtgtgtatgtgtgtgtgtgtgtctgtgtgtgtgtatgtgtgtCTCTTGGGTAGGTTAGA-TCTCCCAGGAGGTCCCTACTAAACAGACTTAAGCCCGCAAAATTTTAGCTCTCCAGCCTCACACACTCCACCCCTCTACCATATTGAATCTTCCCAAACCAACTATGGCTTTCCCTAACTCCGGAGc------ttggcctggaatgccctgcttcccctctttcccctggggaacgcctgtccttcaggcctcagttcacacactgcctcccttgcaaagctctccTCCCATCCCCGGAGTCCCT--CTTCCCCTTTGTTCTTTGGGTTCTATGCTTCTTCCCTCATAACTCCCACCAGGTTGTGTTAAAATGAGTTGTTCAAGGTCCTGTCTGTTCCACTAGATTCTGAGCAACTTGGAGAACGAAGATCCAAACTTCGCTGCCTTTATTTCCTCCTTTGTTCTTTTCTCATCCCCAAGTCCCTTCCAACTTGGAGTTATgaagaaaggaaggaaggaagggtgggagggaagaaCAGGAGGGGATCCCACAGG-AGAATGTGTATAGGGAGAGGACTCAGACTAGCTAAAGCTTTTCCCTCATAATTAATAGCAAATACCATGTTACCTGAATTTAATTCACAGTAGCATACAAAAGACTCGCTTTGTTCT-------CCCCA---------TTGATGTCATCAGAGG--------------------GCTGTGGG--------------CAGGCCTAATCTTGGCTCAGGAGGCCCTCCAGCCTGGATCTAAAGAGCAGCAGATGggccaggctcggtggctcatgcctgtaatcccagcattttgggaggccgaggcgggtggatcacgaggtcaggagtttgagaccagcctggccaagatggtgaagcctcgtctctactaaaaatacaaaaattagccaggtgcggtggtgggcgcctgtatttccagctacccgggaggctgaggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccgaggtcacgccactgcactctagcctgggcaacagagcaagactccgtcaaaaaaaaaataaaaaaataaaaaaataaaaaaaataaaGAGGAGCACACATCTCTGCCCATCCTAACTCCCACTTTGACATTGAGGTCCCCAGGATGGAGGGTCTGCCTCCATCTGCCTTGTCCCCTG-CAATGGTGGGAAGGTGATGGAGCTCAAGTCTAGAGGCCACCAGCTTCTTAGGGAGG--TAGGAGGTG---------------GAGGGTGGGGTGC-GGGCCCTGCACACAACTGCCAAGTGAGGATGGGGGTGGG-GTCCACCTGAGGATAAGTAACAGTGAGGCTGGTGCAGAGGACCCAGGTGGAGGTAGACAGCAGAATTTGTGGTGGGGT--GGATGGCAC-ATTATATAAGCCTCTCTTGC------TGCCCTGT---TTACTGAGATTGTTTCAttatcttttttggcttttgtttttaagagatggggtcttgctgtgtcacacaggctggagtgcactgtgtgatcatacctcactgcagcctcgacatcctgggctcaggcaaacctcccaccttggcctcccaagtagctgggaccacaagcgtttgccaccacactcagctatttttatttttattttta--ttttttttagagatggggtcttgctgtgtcgcccaggctggtcttgaactcctgggctcaagcgatcctcctgccttggcctcccaaagccctgggattataggctgagccaccacacccagccACATTTCATCTGTGCAGCTCCAGGGGCTCCACATTCT-ACTCTTCTCATTTCTTCTCCAGGGTACCC----------ATGGCAAGGGATGAGGGT--AGAAGATGGGGCA--GCCAGGCCTTGATTAAAGGAGAAGGAAGGCAGCCTGTGGAGAGG---GCAGCC---C---AGGGAG---TGCAGAGAGAAGTGGGCCATGAGGGAGA---CAGCAGAGTGCAGGCTGCGTCC---CAAATGAGCATACAGCCCACTGTGAGCCCACC--ATCTTCCTAGA-GA--CCCCTCTCCTCTCC-AGGAGCTGCTTCAGTAGCACTCA---------GAGGAAAGAATGATGC--------TGTATCAACATTTCAGCAGCTCATCTTTTAACTCTAAGAAAATGGCAGCTCCTAAATGTTCAA--AACTGCTTTGGAAACTTCT---GGAGAGAGGTTTTGCAGCTCAGGCAGACAGCTGATCGCGGCCTTTCTTCCACCCCAACCCATGCTCTCCCCATGCT--CTCCTGCCACAGCTGCAGCGGGCCCCTGGGTCCTACATTTGCAG-CCCTTTGTCTCTGAGCT-----CAGACTTCCAATTCCAAGCGGCAGCTGGGCAGGCTCACCAGCATGT---CCAGCCAGTACTAGGACATCAGCAGGAGC----CCAACCACCTCTTTCCAAAATCTCTCCTCATGTCTCTCCTAGTTTCCATCTCCATCCTTCTAGTCAGCCAGGCTGAAAACATT-----------------TGCTCCTCAGGGTGCAGAAGGGAAAGCTTTGCCTCCCTTCCTGGTGCTCACTGCCCCTGCGATTCCAGCCCAAGCCCTCCCCGGCTCCTCACC----------CTGGTGTCAGCTGGAAGCCACCATCTCCTAAACCCACCTGtgttcttccacctctgc--------cagggctgc-cctctcctccaccttcacaaactcaattcctacccattctcaggtcccttatcaaatgccatctcctccatgatgcctccctgattccccTGCTGGAaataatggtgataacagctaag--gcattggggttggctacgtgccaggcaaggagttggcactttacatgctttatctcatttcagccacataacatcgacaggt-ggcattatgattcatatcatccccatctgatagccaggaaaactgagtcccagagaggttagc-cactttcctagggccCTGTGCTCTGACTCAAGCATAGCTCTGAGGAACTCTAGCATTCATCAGTTTAAGCACCATGACTTTCTTTGCTGAGTCACCCAAGGCAT-TTCTTCATTTAAATGTTCTTCCTTGGCCAGGCGCAGTGGCTCAggcccaatgcggtggctcacgcctgtaatctcaacactttgggaggccgaggtgggcagataatctgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaaaatgaggctgggcgtgatgactcacacctgtaatcccagcactttgggaggccaaggcaggtggattacatgaggtcaggagttcgagaccagcctggccaacatggtgaaatcctatctctattaaaaatacaaaaaattagccaggcatggtggcaggcacctgtaatcccagctacttgggaggctgaggcaggaaaatggcttgaacccgggaggtggaggttgcagtgagccaaggttgcaccattgcactccagcctgggcaaaaagagggaaacatcgtctaaaaaagaaaaaaaaaaaattagccaggctgggtggtgcatgcccgtaattccagctactcaggaggatgaagcaagagaattgcttgaacccaggaggcagagattacagtgagctgagatcacaacactgcactccagcctaggtaaagaacaagactccatctcaaaaataaataaataaaaataaaTGTTCTTCCTTGCAATGAAGTTAAATATGTAAATTCTCAAACCAGTTGCTTAAGGGCACAGTTTTGTTCTTTACCTATATTTTTAACAAATATTTTATGTAAGTAGTTGAC-AAAATCAAATACTGT-GTACACTACCGAGGCTTCCCTGGGAAAGCCATCAG-CCTCTGCCCCATCCCTTCCCACTCCTGATT-CCACTTTCCTGTGTTTCCATATCTTTTTCATGTCTGTTTCTGGCCCACAGTGGGCGATCAATACATGTTAGCCACCAACCATCAAACCTATATTGAGTAATTATGGTATGTCAGGCACTATGCTCAATGAAATTGTAttaggcttgtacaaaagtaattgtggtttttaagagtaatggcaaaaacggcagttactttcgcaccaacTATTTGCTGCCTTGAATTATTCCTCCTCTC-CTCATCCCTAAACCCTGCTCCTCCCAGCCATTCTTCCTCCCCTTCTTGGGCCATGGCCAGGCCCCACCCAGGTACTAAGACTCAGGTGAACCAAGGAAGACTTAATGCCCACTCTTTTCTGATGCCCATGTT--GGCATGTGTTAAGtcggttagcattaagtttggctgcatttagcagagacccaaaagaacagtgccttttaaaaggcagaggttatgtctctcacacacacccagcacaagtccaag-------------------------accagcatggcatctcagctccatcaa--cctcaggaaccgagctcctgcagctccctgccctgcagttgataaggtgaggtctttgtcctcctggttcaagatggtgctagaatgttggctaccatatctatagtccaggcatcagaatggagcaagggatgaaaaaggaagagatgaaggcacacgacaggttcctgagagctggcacaggacacttctgcttatatttcactggccagaacttagtcacatggtcacacctagttgggagactctgagaagtaa----agtatttattctagatggccatatccctacc-taagacttggagttttctatgactggggaagaacggaagacaagatattgggaaagactagcagcctctactaAAAGGGTGATCtgtgttgatgtgcgtgtgtgtgtgatgtttgtatg---agcatgtgtgt-tatgtgttgt--gtgtTGGTGGGGCA--GATTCTTGCGAGCACTTTGGTCTCAGATGGACCTGCTACCAGTTCTCTCTGCAGACCCCCATAGGTTTCTCCTAAACCTGGCCT-CTCCTATTAGGCAGCCTTACTCAGCGGCAGCTTCTCAGCTCCATGTTTTCAAGGAACCACAATTTATTTCCAGCATCCACTGAAGCATATTATCAGTGGTGATAGAGGGGGCTTGTAAAACTGTTTTTCCACTTAGGTATTAGAGGGTGGCCATTATTTGAGAGTGAC-----TATGACCACAGTTAATCTGGTAATAAATTCTCTTGGGTAGGAGGGGGAAAGGAAAGGATGCTTTAAGGAAGCATCTTGCCAGGAGACACAAAGCTAACAAGAGTGGAGCCTGCAG----------------------------CTGGAGCCGCAGAGCCTAATCACTACACCCGCCCATCTCTGCTAGGGTTTCATGACTTCGTATCGGGGATTAGCAGTATTTAACTCTGTTGCACAAACATTTGGTGTA-----TTATTCAGGTAACAAGTAGCTAATAGAGGAAGTTTTACTTTTTTAAGACATAA--------------------ATTTGCCTTTTCCCAAATTACTTGGTACATAGTAC-TTTTCATGTTTGAAGTTGAGATGTGGGTACAATACCATAGCTTTATTCCAGAGCAGGGTATTTGTTTCCAAATGCCATGTTCCCAGCAGCTGCCCTTGACTGGGAATTGGGGTG-----TGATTTGGGCTTTTCCTTAAATCCTTGA-----GGAGCTGGA---GGGGTGGGTGGCTCGCACTCCTGCTTTctgg---------atctgaatc--------------ctgactctgtcatggacctgtt-tgactttgggcaagttgactcctattcctgagccccatat-ttttctcttctgtgaaattcagattaaaaA-AACATGGCTTTGATCAAACATTATAAATAATATATAGACAGACTGCTTGTTTTTATTGTATTGCCAG-AAATGAATCCTACTAATATTGCCATCTATGGACAGAAAATGTATTACCTGTCTTCATCAAGACCCAGACGAGGAAGAACACGAAAAGCGGAGATTAATTTTACTGCCATCTCCAGAACCGTCATCCTAATATTTACTTACAT-TTTATTATTATTTCAGGCTCATGCACATATACTTAGCATGGATCATTGGCCACAGACTCGCATACATTTAACTTTATTACCTTT-TGCCTCATGTATCTCATTAAAATTTTGCTGCTTAATCAAGGATCTGCATATTATTTTAATTTTAGAATTCACAGTTCCAAGACTTTGAAAGTTTCAAGCGTTCTGGGTGaatgtgttatgc--tctctcccgccaccatgtctttataccccctgatttctcagccact-atggcaaccactttctactcttagtagcccatatttag--tccaatccccagctcaggagacacttcttccaggg--agccccctgtgccttccagtagtatcttgtacctgccctttttgcaaagctctttcctcctggcttagaatggcccattgacctgtttgtttctcctattaaactgtaagccactcgagggtagagagcatctgttgttcaccattgcatcctcggtgctgagcactgcgtctgacatattatttagaaggtcagtaagtgctagtgggatTCAGGCTCCCAGTGGGTGGGAGAGAAAGGACGTAAGGAAGCAAGTGGTAAAGGCCCTCACAGA-GTATCAGCAGGCTGGTGTGA-GGGAGAAATGCAGAGGATGGGTGAGTAGCA-----TAATCGCTAATGAT-AGGGTAATGATAGAGCACATTTCACAACACCTTt-aagccctttcacgtgcatcagataatttgatcctcataaaagcctagagatagatatattacagg-gatgaaggtggagtattttgtggttatgtgatatg-tttaaaattatgcagtgagtaaatgactgggttcaaaccagaccttaaaagtctgttatctttccCTCG-AGCATGCAATGAAGTCTACATCATCCCTACCATGTCCATTTGATCACACCCTGGCCTCACAGCTCTGTGGTCTACAGGATACCTCATGGTGGTTTTATTGACCAGACAATAATCCTCTTTCTAAGGGGATGCATTTCATTAATACATATGTAGATCATGAATTGTCTTTGACTTTGAGGGGATGGTAGC----CAGAGCAGAAAGCAAAGCTGATTTTCATCCCCGTCTGGTAATGTGGTTGGTAATGTGAAGA-TGGGTGTATTCTGAGATACCGGCTCCTTGCAGTGTGTGGTTCCTTCTGTTTTCAGGCCC------AAGAAGCCCATCCTGGGAAGGAAAATGCATTGGGGAACCCTGTGCGGATTCTTGTGGCTTTGGCCCTATCTTTTCTATGTCCAAGCTGTGCCCATCCAAAAAGTCCAAGATGACACCAAAACCCTCATCAAGACAATTGTCACCAGGATCAATGACATTTCACACACGGTAAGGAG---AGTATGCGGGGACAAA---GTAGAACTGCAGCCAGCCCAGCACTGGCTCCTAGTGGCACT-GGACC-CAGATAGtccaagaaacatttattgaacgcctcctgaatgccaggcacctactggaagctgagaaGGATTTGAAAGCACAGGGC-TCCACTCTTTCTGGTTGTTTCTTTTGGCCCCTCTGCCTGCTGAGATTCCAGGGGTTAGTGG--------------------------------------------------------TTCTAATTCTAAACCACTCCAAGAACATTTGATTTTGCTACATGTTTCCATTTAAAAATCATAGGATTTGggctgggtgtggtggcttgtacctgtcatcccagcactttgggaggccaaagcaggaggatcattcgagcccaagagttcgagaccagcctgggcagcatagggagaccccatctctacaaaaataataaaaaatgttagctgggcatggtggtgtgtacctgtggtcccagctaggggaggctgagatggaaggatcacctgagcctgggaggttgaggctgcagtgggccctgatcatgccaccgtgctccagcctgggtgacagagtgagaccttgtctcaaaataaataaataaataaataaaAGTCATAGGATTTgatcaggcatgatgggtcacatctgtaagcccattgctttaggaggccaaggtaggaggatcagttgaggccaggagttcaagaccagcctgggcaacatggcaagacctctctctctaatttttaaaaaaataaaaaTTAAAGATAAGAAAAAAATCATAGGATTCTCATGAGGCCTCACGTGCTTATTTTCAACCTACCAAGGGGAAACCCAGGCCTCAGCGATTAGCTGAGC----------CACATGCAGGCACAG------------------------CCACTG-----TCTCTTTCCTTCCTGTCCCCTCTGTCCCCACCTTCTGCGCTCGCCTTCCTCCCTGACTTCACTTCCTTGAATCTTAGTGCCTACGACCAGAGGGAGCTGTGAAGTTCCTTG----TGTCCCATTGGCAGGAA-CAAGACCCCCAGAAGCATCTCCTCAGGGC------CTCTA-----TCCCATCTC-TAGATGTGCTTGTCATTAGG-Gttct-------------tgtagttccagctgatctctggccctgccgctcaaagatacccaaaagagcgagtctaccctttttcacattcaaccctctactgatttgcaaatagcagtcagtgcccaccctggtcttttctctggggtccagcaggcctagaccttcagccattttcctgatgaGGTCTGTAtttgaaattaggaagattaagtttgaatcttcacacttctgat----gtctgtgagatcttcagcaagttccttact--gtctttaagccttgt-tttcatcatctggataatggggatatcacacacta-ttcacaaggttgttatgaggcctaaattagctaaagcaATTGAATCCTCCTTACCCCCTGCATGGAGCTCTCTGGAGACTTCCACGTCTCCTGGTCATTGTGGGTGTCTTATGGTA-GTCTTGGGCAGTTAGGGAGAAGTTAGGTGTCTGGAAGCAAAGATGGCTCAGAACTAGATAGAGTC-TTGGGCATTTTATA-GATAAAAACTCTT--GTCTCCtttaaaaataataaaaaaaaattaGCTGGGCATATTAGCCACTCAGCAAGACTGCACGTGATAGATCCCGAGTGCCCCACCTTGGGTGGTGTAATACACAATATCACGGGAGCCCCGGGTAGTAACCACGGAGGTGTCAGCCTCAGTGCTGTGGGCAGATG-GATGGGGAGAGCC--TCCCGG-AACTGGAGTCACTGGAGCA----------------------------GGGTTGGGGGGCCTCACTGAGGGTACGGCCTTGATCTCTAAGGAGGAGGGACTGCCTGGAAAAGC-TGACTGGGAGGGAGGACTCGGCTGGGGGTAGAAGGGA----------CTAGGGAAGGCTGGGGGTGGGGGTGCTTATGGAGGACCTCAGATGCCTGGGGAACAGACTCCACTAAATAAAACATATGAAACCATGGCTGGTTCTTCAGCAGAGGCCATGTAGAGAAAGGAATGACCTAGGAAAGTTGGCCTGGAAGTGGAGGGAAGGATGGTGTGGGAAAAGCAGGAA--------TCTCGGAGACCAGCTTAGAGGCTTGGCAGTCACCTGGGTGCAGG-ATACAAGGGCCTGAGCCAAAGTGGTGAGGGAGGGTGGAAGGAGGCAGCCCAGAGAATGACCCTCCATGCCCACGGGGAAGGCAGAGGGCTCT-GAGAGCGA--TTCCTCCCACATG-CT-GAGCACTTGTTCTCCCTCTTCCTCCTGCATAGCAGTCAGTCTCCTCCAAACAGAAAGTCACCGGTTTGGACTTCATTCCTGGGCTCCACCCCATCCTGACCTTATCCAAGATGGACCAGACACTGGCAGTCTACCAACAGATCCTCACCAGTATGCCTTCCAGAAACGTGATCCAAATATCCAACGACCTGGAGAACCTCCGGGATCTTCTTCACGTGCTGGCCTTCTCTAAGAGCTGCCACTTGCCCTGGGCCAGTGGCCTGGAGACCTTGGACAGCCTGGGGGGTGTCCTGGAAGCTTCAGGCTACTCCACAGAGGTGGTGGCCCTGAGCAGGCTGCAGGGGTCTCTGCAGGACATGCTGTGGCAGCTGGACCTCAGCCCTGGGTGCTGAGGCCTTGAAGGTCACTCTTCCTGCAAGGACTACGTTAAGGGAAGGAACTCTGGCTTCCAGGTATCTCCAGGATTGAAGAGCATTGCATGGACACCCCTTATCCAGGACTCTGTCAATT--TCCCTGACTCCTCTAAGCCACTCTTCCAAAGGCATAAGACCCTAAGCCTCCTTTTGCTTGAAACCAAAGATATATACACAGGATCCTATTCTCACCAGGAAGGGGG-TCCACCC-AGCAAAGAGTGGGCTGCATCTGGGATTCCCACCAAGGTCTTCAGCCATCA---ACAAGAGTTGTCTTGTCCCCTCT-TGACCCATCT-----------------CCCCCTCACTGAATGCCTCAATGTGACCAGGGGTGATTTCAGAGAGGGCAGAGGGGTAGGCAGAGCCTTTGGATGACCA--GAACAAGGTTCCCTCTGAGAATTCCAAGGAGTTCCATGAAGACCACATCCACACACG--CAGGAACTCCC--AGCAACACAAGCTGGAA---GCACATGTTTATTTATTCTGCATTTTATTCTGGATGGATTTGAAGCAAAGCACCAGCTTCTCCAGGCTCTTTGGGGTCAGCCAGGGCCAGGGGTCTCCCTGGAGTGCAGTTTCCAATCCCATAGATGGGTC-TGGCTGAGCTGAACCCA---TTTTGAGTGACT----CGAGGGTTGGG-TTCATCTGAGCAAGAGCTGGCAAAGGTGGCTCTCCAGTTAGTTCTCTCGTAACTGGTTTCATTTCTACTGTGACTGATGTTACATCACAGTGTTTGCAATGGTGTTGCCCTGAGTGGATCTCCAAGGACCAGGTTATTTTAAAA---AGATTTGTTTTGTCAAGTGTCATATGTAGGTGTCTGCACCCAGGGGTGGG-GAATGTTTGGGCAGAAGGGAGAAGGATCTAGAATGTGTTTTCTGAATAACATTTGTGTGGTGGGTTCTTTGGAAGGAGTGAGA-TCATTTTCTTATCTTCTGCAATTGCTTAGGATGTTTTTCATGAAAA------------TAGCTCTTTCAG-GGGGGTTGTGAGGCCTGGCCAGGCACCCCCTGGAGAGAAGTTTCTGGCCCTGGCTGACCCCAAAGAGCCTGGAGAAGCTGATGCTTTGCTTCAAATCCATCCAGAATAAAACGCAAAGGGCTGAAAGCCATTTGTTGGGGCAGTGGTAAGCTCTGGCTTTCTCCGACTGCTAGGGAGTGGTCTTTCCTATCATGGAGTGACGGTCCCACACTGGTGACTGCGATCTTCAGAGCAGGGGTCCTTGGTGT-GACCCTCTGAATGGTCCAGGGTTGATCACACTCTGGGTTTATTACATGGCAG-----TGTTCCTATTTGGGGCTTGCATGCCAAATTGTAGTTCTTGTCTGATTGGCTCACCC-AAGCAAGGCCAAAATTACCAAAAATCTTGGGGGG--TTTTTACTC-CAGTGGTGAAGAAAACTCCTTTAGCAGG-TGGTCCTGAGACCT-GACAAGCACTGCTAGGCGAGTGCCAGGACTCCCCAGGCCAGGCCACCAGGATGGCCCTTCCCACTGGAGGTCACATTCAGGAAGATGAAAGAGGAGGTTTGGGGTCTGCCACCATCCTGCTGCTGTGTTTTTGCTATCACACAGTGGGTGGTGGATCTGTCCAAGGAAACTTGAATCAAAGCAGTTAAC-TTTAAGactgagcacctgcttcatgctcagccctgactggtgctataggctggagaagctcacccaataaacattaagatt-gaggcctgccctcagggatcttgcattcccagtggTCAAACC-GCACTCACCCATGTGCCAAGGTGGGGTA-TTTACCACAGCAG--CTGAACAGCCAAATGCATGGTGCAGTTGACAGCAGGTGGGAAATGGTATGAGCTGAGGGGGGCCGTGCCCAGGGGCCCACAGG-GAACCCTGCTTGCACTTTGTAACATGTTTA-----CTTTTCagggcatcttagctt---ctatta-----tagccacatccctttga---aacaagataactgagaatttaaaaataagaa-----aata--TGACCCCAAAGAGCCTGGAGAAGCTGATGCTTTGCTTCAAATCCATCCAGAATAAAACGCAGACCCCAAAGAGCCTGGAGAAGCTGATGCTTTGCTTCAAATCCATCCAGAATAAAACGCAGATGCTTTGCTTCAAATCCATCCAGAATAAAACGCAAATGACCCCAAAGAGCCTGGAGAAGCTGATGCTTTGCTTCAAATCCATCCAGAATAAAACGCATGACCCCAAAGAGCCTGGAGAAGCTGATGCTTTGCTTCAAATCCATCCAGAATAAAACGCAGACCCCAAAGAGCCTGGAGAAGCTGATGCTTTGCTTCAAATCCATCCAGAATAAAACGCAGATGCTTTGCTTCAAATCCATCCAGAATAAAACGCAGACCCCAAAGAGCCTGGAGAAGCTGATGCTTTGCTTCAAATCCATCCAGAATAAAACGCAGACCCCAAAGAGCCTGGAGAAGCTGATGCTTTGCTTCAAATCCATCCAGAATAAAACGCAGACCCCAAAGAGCCTGGAGAAGCTGATGCTTTGCTTCAAATCCATCCAGAATAAAACGCAGATGCTTTGCTTCAAATCCATCCAGAATAAAACGCA

File test-data/1.fastq

View file
+@HANNIBAL_1_FC302VTAAXX:2:1:228:167
+GAATTGATCAGGACATAGGACAACTGTAGGCACCAT
++HANNIBAL_1_FC302VTAAXX:2:1:228:167
+40 40 40 40 35 40 40 40 25 40 40 26 40 9 33 11 40 35 17 40 40 33 40 7 9 15 3 22 15 30 11 17 9 4 9 4
+@HANNIBAL_1_FC302VTAAXX:2:1:156:340
+GAGTTCTCGTCGCCTGTAGGCACCATCAATCGTATG
++HANNIBAL_1_FC302VTAAXX:2:1:156:340
+40 15 40 17 6 36 40 40 40 25 40 9 35 33 40 14 14 18 15 17 19 28 31 4 24 18 27 14 15 18 2 8 12 8 11 9

File test-data/1.fastqsanger

View file
+@1831_573_1004/1
+AATACTTTCGGCGCCCTAAACCAGCTCACTGGGG
++
+><C&&9952+C>5<.?<79,=42<292:<(9/-7
+@1831_573_1050/1
+TTTATGGGTATGGCCGCTCACAGGCCAGCGGCCT
++
+;@@17?@=>7??@A8?==@4A?A4)&+.'&+'1,

File test-data/1.fastqsolexa

View file
+@HANNIBAL_1_FC302VTAAXX:2:1:228:167
+GAATTGATCAGGACATAGGACAACTGTAGGCACCAT
++HANNIBAL_1_FC302VTAAXX:2:1:228:167
+40 40 40 40 35 40 40 40 25 40 40 26 40 9 33 11 40 35 17 40 40 33 40 7 9 15 3 22 15 30 11 17 9 4 9 4
+@HANNIBAL_1_FC302VTAAXX:2:1:156:340
+GAGTTCTCGTCGCCTGTAGGCACCATCAATCGTATG
++HANNIBAL_1_FC302VTAAXX:2:1:156:340
+40 15 40 17 6 36 40 40 40 25 40 9 35 33 40 14 14 18 15 17 19 28 31 4 24 18 27 14 15 18 2 8 12 8 11 9

File test-data/1.interval

View file
+chr1	4348187	4348589	3.70	4.90	2.55	0.24	0.46
+chr1	4488177	4488442	4.03	5.77	1.92	-0.67	0.81
+chr1	4774091	4774440	8.07	8.33	7.82	0.85	-0.40
+chr1	4800122	4800409	6.40	7.35	5.44	1.19	-0.42