Ranking of TNRS sources

Issue #3 new
Brian O'Meara repo owner created an issue

Match to mammals, say, then if that fails, match to NCBI

Comments (2)

  1. Scott Chamberlain

    How do you imagine this working? The user can select this option, or just do this behind the scenes?

  2. Brian O'Meara reporter

    OpenTree's TNRS works this way: for taxa that match perfectly, it sees what taxonomic context they're in (mammals, plants, etc) and uses that for the rest, unless the user overrides. We are moving to using OpenTree's TNRS for now, but will revisit the TNRS options in general as phylotastic develops (i.e., maybe want to make it so that users can choose which TNRS to use: iPlant, OpenTree, etc.)

  3. Log in to comment