export-expression is selecting on gene_id irrespective of species

Issue #261 new
Cat Munro
created an issue

In the function counts_table, the counts are grouped by gene id, which is not unique and may affect the result. I think the counts should be grouped by models.catalog_id, genes.gene.

To see if this makes a difference, we would have to add new test data from another species. I suggest adding test data from Agalma elegans.

Comments (1)

  1. Cat Munro reporter

    The counts table is built separately for each species. Even though gene ids are not unique across species, they are unique within species, so this does not appear to affect the result.

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